| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0930 |
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| Symbol | |
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| ID | 4077558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 993036 |
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| End bp | 994274 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006233 |
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| Product | major facilitator transporter |
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| Protein accession | YP_612925 |
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| Protein GI | 99080771 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.218568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0396235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCC CCCTGCGATT CCACGAATTT CTGTTGCGCA ACGCCCCCTA TCTTTCGGCA
GGGGTCTTGC TGACGTTCCT GTCGAGCTTT GGTCAGACCT TTTTCATTTC GGTATTTGCC
GGGCCTATTC AGGCAGAGTT TGGTCTGAGC CACGCCGGAT GGGGTGCCAT CTACATGGTG
GGGACCACGG CCTCTGCACT TGTGATGGTG GCGGCAGGTG GTCTGTCGGA TGTGCTGCGG
GTGCGCCAGC TCGGGGCCTT TGTGCTCTGT GGACTGGCGG CGGCCTGCGT ACTGATGGCG
CTCAATCGCA ACTATTGGGT CCTGCCGCTC TCTGTCTTTG CGTTGCGCTT TTTCGGACAG
GGTATGAGCA CTCATCTCGC GGTGGTTGCC ATGGCGCGCT GGTTTGTGGC CACGCGCGGA
CGGGCGCTGT CGATTGCGGC TCTGGGCGTA TCCTTTGGTC AGGCGCTCCT GCCGCTGATC
TTTGTGGCGT TGATGGTGCG CTTTGACTGG CGCATGCTCT GGCTTCTGAG CGCGGCGATC
TGTCTGCTTG GTGCGCCGTT GCTCTTGCAT CTGTTGTCAC AAGAGCGCAC ACCGCGTGCC
ACCTCTCAGG ACGTGAGCAG CACCGGCATG GACAACCGCC ACTGGTCCCG CGGCGAGGTG
CTGCGCACGC CGCTCTTTTG GCTGATGGTG CCATCGATTC TGGGTCCGGC GGCCTTTTCG
ACCGCCTTCT TCTTTCATCA ACTGCATTTC GCCACCACCA AAGGCTGGAG CCTGTTGGAG
CTGGTGGCCT ATTTCCCGTT TTTCACAGTG ATGTCCGTTC TTGCCATGCT GGTTGCGGGC
TGGGCACTGG ATCGCTGGGG CGCGGCGCGG CTGATGCCGC TCTATCAGCT GCCAATGGTT
GCGGCTTTTG CGATCTTTGC CACCACCGCC AGCGGTATCG GCATGGCAGC GGGTTTCCTT
GCAATGGCGC TCTCGGTAGG CGCGCATGCG GTACTACCAA GTTCGTTCTG GGCCGAGGCC
TATGGCACGC GCTATATCGG TGCGATCAAA TCGCTGGTCA TGGCGGTGAT GGTCTTTGGC
ACCGCGATCG GCCCGGGCCT GACCGGAGCG CTTATCGACC TCGGGCTTGA TTTCGACGCC
CAAGGCTACG GCATCGCGGT CTACTTCCTG CTAACAACAC TCTGCATCTG GGTCGGCGTG
CGCGGCGCGC GACAGCGCTT GACCCCACGC GCAGCCTGA
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| Protein sequence | MAAPLRFHEF LLRNAPYLSA GVLLTFLSSF GQTFFISVFA GPIQAEFGLS HAGWGAIYMV
GTTASALVMV AAGGLSDVLR VRQLGAFVLC GLAAACVLMA LNRNYWVLPL SVFALRFFGQ
GMSTHLAVVA MARWFVATRG RALSIAALGV SFGQALLPLI FVALMVRFDW RMLWLLSAAI
CLLGAPLLLH LLSQERTPRA TSQDVSSTGM DNRHWSRGEV LRTPLFWLMV PSILGPAAFS
TAFFFHQLHF ATTKGWSLLE LVAYFPFFTV MSVLAMLVAG WALDRWGAAR LMPLYQLPMV
AAFAIFATTA SGIGMAAGFL AMALSVGAHA VLPSSFWAEA YGTRYIGAIK SLVMAVMVFG
TAIGPGLTGA LIDLGLDFDA QGYGIAVYFL LTTLCIWVGV RGARQRLTPR AA
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