| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0920 |
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| Symbol | |
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| ID | 4077548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 980789 |
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| End bp | 982579 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006223 |
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| Product | ABC transporter related |
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| Protein accession | YP_612915 |
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| Protein GI | 99080761 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGGA TTTCGCTGAC CTTTGGTGGC GATCCGGTGT TTTCCGACCT CGACCTCGTG
GTGCAGCCCG GCGACCGGGT TGCGCTTGTG GGGCGCAATG GCTCGGGTAA ATCGACCTTG
ATGAAAGTCA TGGCCGGTCT TGTGGAGGCG GATGCCGGCT CCATCGTGAT CCCGCCCGGA
AATTCCGCCG GCTACATGGA GCAAGACCCC AAGATGGAGG GCTTTGCCAC GCTGGGGGAT
TTTGCGGCCT CGGCACTGGA ACCCGGCGAG CTTTATAAAG TGGAGCGCGC AGGCGAGGGG
CTGAAGTTCG ACCCCGCCCG CCCGGTGGAA ACCGCTTCGG GCGGGGAACG TCGGCGCGCG
GCGCTGGCGA AACTCATGGC CGAGGCGCCC GAGCTGATGC TCTTGGACGA GCCGACCAAC
CACCTTGATA TCGAAGCGAT TTCCTGGCTC GAGGGTGAGC TGGCCTCAAC CCGTGCAGCC
TTTGTGCTGA TCTCGCACGA CCGCGCGTTT CTGCGCGCTC TGACCCGCGC GACCCTCTGG
GTGGACCGCG GTCAGGTGCG CCGTCAGGAC AAGGGGTTCG AGCATTTTGA GGCGTGGCGC
GACAAGGTTT GGGAAGACGA AGACATGCAG CGCCACAAGC TCAACCGCCT GATCAAATCC
GAAAGCCGCT GGGCGGTCGA AGGCATCTCG GCCCGGCGCA AACGCAACAT GGGTCGGGTG
CGCGCTTTGC AGGATCTGAA ATCCGAACGC GCGAGCCAGA TCAAACGACA GGGCGCGGCG
GCGATGGAGC TGGAGGCGGG GCCAAAGTCC GGCCGCAAGG TTATCGAGGC CGAAGGTATC
ACCAAACGCT TTGGCGACAA ACAGATCCTC AACCACTTCT CCCTGACGGT GCAGCGCGGT
GAGCGCGTCG CCTTTGTGGG GCCGAACGGC GTGGGCAAGA CGACGCTGTT GAAGATGCTT
CTCGGGCAGG AAACGCCGGA TGAGGGCACA GTCAAACTGG GCACGAATCT GGAGGTCGCA
GTCTTTGATC AGACCCGCGA TCAGCTCGAT GGCGATTCGA GCCTGTGGGA GAACCTCACC
GCGGATCCCT TGATGGGGAT TTCTGGCAAG GCAGATCAGG TGATGGTGCG CGGACAGCCC
AAACATGTGG TGGGCTATCT GAAGGAGTTC CTTTTTGATG AGCGCCAAGC CCGCGCACCG
GTGCGCTCGC TCTCGGGTGG GGAAAAGGCC CGGCTTCTGC TCGCGAAACT CATGGCGCGC
CCATCGAACA TGCTGGTGCT GGACGAGCCG ACCAACGACC TCGACGTGGA GACGCTTGAT
CTGTTGCAAG AGCTTCTGGA CGCCTATGAC GGCACCGTAC TGCTGGTAAG TCACGACCGA
GATTTCCTCG ACCGGGTTGC GACGACCTCG GTTGCCATGG AAGGGCAGGG GCAGGCCACG
GTCTATGCGG GCGGCTGGAG CGACTACCTC GCGCAGCGCT CCCCCAAAGC GGCGCCTGAG
AAGGTCGAGA AATCAAAACC GGCAAAATCG AAACCAAAAC CAGAGGCGCA GGCACCCAAA
GAGGCGTTGA GTTTCAAGGA GAAACACCGG CTCGAGGCGC TCCCGGACGA GATTGACCGT
CTTGAGAAAG AGATCGCCAA ACTCGAAGAG CTGATGGCCG ATCCCGAGCT TTTCACCCGC
GAGCCGGTGA AGTTCAAAAA AGCCACAGAG GCCCTGGTGG AACGTCAGGA AAAACTCGCT
GCTGCCGAGG AAGAATGGCT GACGCTGGAA GAAAAAGCGG CTCAGGCTTG A
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| Protein sequence | MSGISLTFGG DPVFSDLDLV VQPGDRVALV GRNGSGKSTL MKVMAGLVEA DAGSIVIPPG
NSAGYMEQDP KMEGFATLGD FAASALEPGE LYKVERAGEG LKFDPARPVE TASGGERRRA
ALAKLMAEAP ELMLLDEPTN HLDIEAISWL EGELASTRAA FVLISHDRAF LRALTRATLW
VDRGQVRRQD KGFEHFEAWR DKVWEDEDMQ RHKLNRLIKS ESRWAVEGIS ARRKRNMGRV
RALQDLKSER ASQIKRQGAA AMELEAGPKS GRKVIEAEGI TKRFGDKQIL NHFSLTVQRG
ERVAFVGPNG VGKTTLLKML LGQETPDEGT VKLGTNLEVA VFDQTRDQLD GDSSLWENLT
ADPLMGISGK ADQVMVRGQP KHVVGYLKEF LFDERQARAP VRSLSGGEKA RLLLAKLMAR
PSNMLVLDEP TNDLDVETLD LLQELLDAYD GTVLLVSHDR DFLDRVATTS VAMEGQGQAT
VYAGGWSDYL AQRSPKAAPE KVEKSKPAKS KPKPEAQAPK EALSFKEKHR LEALPDEIDR
LEKEIAKLEE LMADPELFTR EPVKFKKATE ALVERQEKLA AAEEEWLTLE EKAAQA
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