| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0869 |
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| Symbol | |
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| ID | 4076239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 926009 |
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| End bp | 927346 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006171 |
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| Product | major facilitator transporter |
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| Protein accession | YP_612864 |
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| Protein GI | 99080710 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.422831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.558623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCG CCATTGCGCC CGACGGTGCA ACGGCGGATG CTGTGGCGAT GACCCACGAC
ATTGCATTCA CCTTTGAGAC CCTGCCCGAG GCGGCGCGCC GGCATATTCG CGTGTTTCAG
ATCCATCAGT TTCTGGACCG CTTTGCCATG GGGCTCACGG TGGCGGTGGT TGCGCTTGCG
CTTACGGATC GGGGTATGGA CCTGTTCCAG ATCTCGCTGC TTTTTGGGAT CTACTCGCTG
ACGACCATGA CGACGGAACT TCCGTTTGGC GGCTTGGCCG ACAGTATCGG GCGCAAGCCC
GTGTTTCTCG GGGCTGTGGG CGCCAGTTTG ATGGCGCTGG CCCTGTTTCT GCTGTCGCGC
GATTTTGCTG TGCTGGCGAT GTCCTTCGCC TTTGTCGGCG TGGGGCGGGC CTTGCGGTCT
GGCACGCTTG ATGCGTGGTT TGTTGAGGGG TTCAGGGCCC ATGCCCCCGA CGTGGATGTG
CAGCCCGCAC TGGCCAAGGC GCAATGGGCC AATGCGATGG GGCTTGCCGT GGGGGCGGTT
ATGGGTGGTC TGTTGCCGGA CGCCGTTGGC ACCCTTGGCA TCAGGTATGG GATCAGCATT
TATGATGTGT CCTACGCGGC AAGCTTTGCC GTCATGGTCG GCGTGTTTGC CTACACGCTT
CGCGTCATCA TTGAGCCACC GCGCCCACGA GATGCGCGGG CGCTCCAGCA GGGCTTTGTA
CGCGTGCCTG CGGTGATTGC AGAGGCCGGC GCCCTGGCGC TGAAGCATCC GGTGCTCTCG
CTGCTGTTGA CGGCTTTGGC GCTGTTCCTG ATGGCGACCA ACCCGGTCGA GGTGCTCTGG
CCGACCTATG CCAAACCAAT GCTGGACGCG GACTATGCCA ACACCCTCAT TGGGGCACTG
ACGGCGGGGT ACTTCTTTGC GATCGCCATT GGCGCGGGGA TATCGCCCCG GATCAGTCGA
CTGTTCAGGC GGCGCTCTGC GGTCGTGCTG GCCGCGCTTT TTGCCTGTCT TGCGGCTGCG
CAGGTCGTCC TTGCGATCCA AGGCAGTGTC GCTGGTTTTG TCTGCATGTT TCTGATCTAC
GCGGTCCTGC TGGGCGCAAG CGAGACACCC GCAAGCAGCC TGTTGCACGC GTGTGTGGCG
GACCGTCAGC GCTCCACCAT GCTGTCGCTG CGCTCTTTGA TCCAGCAGCT TGGGGCGGCG
GTTGGGCTGC TAATGGCTGG AGGCCTTGCT GAGATCTACA CGACCTCGCT CGCCTGGATC
ATTGGGGCGG TGTTCCTGCT GATTGCGGTG GGGCTGTGCC TGATCTTGGC CAAACGCCTC
GCGGGTTCCG GGCGCTAG
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| Protein sequence | MKCAIAPDGA TADAVAMTHD IAFTFETLPE AARRHIRVFQ IHQFLDRFAM GLTVAVVALA
LTDRGMDLFQ ISLLFGIYSL TTMTTELPFG GLADSIGRKP VFLGAVGASL MALALFLLSR
DFAVLAMSFA FVGVGRALRS GTLDAWFVEG FRAHAPDVDV QPALAKAQWA NAMGLAVGAV
MGGLLPDAVG TLGIRYGISI YDVSYAASFA VMVGVFAYTL RVIIEPPRPR DARALQQGFV
RVPAVIAEAG ALALKHPVLS LLLTALALFL MATNPVEVLW PTYAKPMLDA DYANTLIGAL
TAGYFFAIAI GAGISPRISR LFRRRSAVVL AALFACLAAA QVVLAIQGSV AGFVCMFLIY
AVLLGASETP ASSLLHACVA DRQRSTMLSL RSLIQQLGAA VGLLMAGGLA EIYTTSLAWI
IGAVFLLIAV GLCLILAKRL AGSGR
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