| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0848 |
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| Symbol | |
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| ID | 4076023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 900379 |
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| End bp | 901287 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006146 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612843 |
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| Protein GI | 99080689 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0228944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTTA AACTCCGCCA GCTTCAGGCT TTCAGGGCCG TTGCGGAAAC CGGCAGCATC
ACCAAGGCGG CAGAGGCGCT TGGCGTCTCG CAGCCTGCAG TGAGTCGCCT GATTTCGGAT
TTTTCCGCGT CCATGGACCT GGAATTGTTC CAGCGCCGCC GCGGCATCCT CGAACCGACA
AGCGATTCTC GCCATCTTCT GACCGAGGTG CGCCGGATTC TCGCAGGGCT TGATCACCTA
GAAGATCTGC GCCGCGATCT GAAGGAACGC ACGGGCGGGC ACATGCGGAT TGCCTGCCTG
CCGGGATTTG CCACCTCTCA TCTGCCTCAG GTTCTTGCCC AGTTTATGAA GGAACGCCCC
GGCGTCACCG TGGCGCTGGA ACCCGACCGC CCCGAGCGCA TCCTGGAGTG GATCATAGGA
GAGCAATATG ACTGTGGTAT AACGGATGAC TTTGCCGGCC ACCCCGCCAC CGAGAGCATT
GATCTCTTTG TGCGTTCGGC CTGCATCCTG CCTCCAAGGC ATCCGCTCGA GCACAAGACC
ATCATCACCC CGCGCGATCT GGCCGGTGAA AAACTCATTC ATACCCGGCG CGACAGCGGC
TTTTATCGTC GTCTGTCCCG GGCCTTTGCG GAATATGAAA CGGAGATGAA CAGCCTCATT
GAGGTGCGCC AGTTTACCAC TGCCTGCCTC ATGGTGCGCG AGGGCGTGGG GGCCTCGGTG
GTGAGTGCGC TGGACGCTGA GGGGTTTCGC GACAGAGGGA TTGTGATCAA ACCTTTCGAG
CCAAAGATCC ACCACCGGTT GTCGATCCTC TTCCCCAGCG CCGTCAGCGT GCCGCGCGTG
GTGCGTGATT TTATGGATGT CTTTGTCGAA AGCCTCTCCC CGGTGCTGGC CTCGCCCGCA
CCGAAATAG
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| Protein sequence | MQFKLRQLQA FRAVAETGSI TKAAEALGVS QPAVSRLISD FSASMDLELF QRRRGILEPT
SDSRHLLTEV RRILAGLDHL EDLRRDLKER TGGHMRIACL PGFATSHLPQ VLAQFMKERP
GVTVALEPDR PERILEWIIG EQYDCGITDD FAGHPATESI DLFVRSACIL PPRHPLEHKT
IITPRDLAGE KLIHTRRDSG FYRRLSRAFA EYETEMNSLI EVRQFTTACL MVREGVGASV
VSALDAEGFR DRGIVIKPFE PKIHHRLSIL FPSAVSVPRV VRDFMDVFVE SLSPVLASPA
PK
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