| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0832 |
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| Symbol | |
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| ID | 4077538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 873956 |
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| End bp | 875506 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006130 |
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| Product | NADH/ubiquinone/plastoquinone (complex I) |
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| Protein accession | YP_612827 |
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| Protein GI | 99080673 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.963821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.388774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATC TCTTCGTGCC CCTCTTCAGC CCGCTGGTTC TGCTGGCCGC TGCCGTTTAT
GCGGCGCGCA ATCCGGGCAA GCGACCGGGA CGGGTGCCGC TTGTGGCAGA ATTGTCCGCG
CTGGCGGCCT TTGGCGGCGC GCTGCTGTCC TCAGCGCTGC TGGCGATGGA AGGCCCCGGC
ACCTCCGCGC TCGTGGGGGC ACTTGGCATC GGGATCTCGG TGCGGCTGGA TGTGGTGAGC
GTTGTGATGC TGGTACTGGT GAGCTTTATC GGCTGGATCG TCCTGCGCTA TGCGCGCACC
TATATGGACG GTGAAGAGCG GCAGGGGGCC TTCACCGCAT GGATGGCCGC GACTCTGGCG
ACGGTACTGC TGTTGGTGAT GGCAGGCAAT CTGGTACAGG TCTTTGCAGC CTGGGTGATG
ACCGGCCTCC TTCTGAACCA ACTGCTGCTG CATTATCCCG AACGCGCCAC GGCGCAGCGG
GCGGCGCGCA AGAAGGCCTT TGTGGCCCGG CTGAGCGAAG TCGCCCTGGC AGTGTCATTT
GTGCTCTTGG TTGTCGCGAC CGGAACCACC GACATCGCGA CCATTCTGGA AAGCGCGACG
GCCACATGGC TGACCATGAG CGCGGCCCTG TTCCTGGCGA TCGCTGCTGT TCTCGCATCG
GCGCAGTTCC CGATGCACGG CTGGCTCACA GAGGTGATGG AAGCGCCCAC ACCGGTCTCG
GCGCTCCTGC ATGCCGGGGT GATCAACGCT GGAGGTTTTC TTCTGATCCG CTTTGCTGAC
GTGATGCTTC TGGCCCCGGG GGTGATGGCG CTCTTGGTGA TGCTGGGCGG GTTCACGGCG
CTCTTTGGCG GACTTGTGAT GCTCACCCAG CCCGCAGTCA AAACCTCGCT GGCGTGGTCC
ACCATTGCGC AGATGGCGTT CATGATGATG CAGTGTGGCC TTGCGCTCTT CCCGCTGGCG
CTGCTGCATA TCGTGGCCCA TTCGCTCTAC AAGGCGCATG CCTTCCTGCG CTCGGGAGAA
GCGGTGCGCA ATGTCGCCAA GATCCGCCGG CCCGGCCCGG TCGCGGTGCC AAGCCTGCGC
AATGTGGCCC AGGCCTTTCT GAGCGCCATT GCGATCTACG CGCTGGTCGG GCTTGGTCTT
GGCTTTGACG GGAAATCGGC GCAGGCCATC GCGCTGGGTG TGATCTTGAT CTTTGGTGTG
GCCTATCTTC TGGCGCAGGG CTTTGCTGAC GAAGCACCGC GCGCCCTGAT GCGTCGCACC
GTGGTCTATG CGCTGGCCAC ATCGCTGAGC TACTTCGCAC TGCAGGTGAT CGCCGTGTCG
CTGACCAAGG GCACCTTGCC CGCAACCCCT GCACCTGGAC CGCTGGAATG GGCACTGCTG
GTGCTGGCTC TCCTAAGCTT CGGCCTGGTG GCGATTGCAC AATCGACCTT CCCCCTCTGG
GCCACGCATC CAGCCGCGGC AGGTCTGCGG GTCCATCTGA CCAACGGGCT TTATGCCAAT
GCGATCTTTG ACAAGCTGCT GGACGGTTGG TCCAAGCGCG CTGCAACCTG A
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| Protein sequence | MSYLFVPLFS PLVLLAAAVY AARNPGKRPG RVPLVAELSA LAAFGGALLS SALLAMEGPG
TSALVGALGI GISVRLDVVS VVMLVLVSFI GWIVLRYART YMDGEERQGA FTAWMAATLA
TVLLLVMAGN LVQVFAAWVM TGLLLNQLLL HYPERATAQR AARKKAFVAR LSEVALAVSF
VLLVVATGTT DIATILESAT ATWLTMSAAL FLAIAAVLAS AQFPMHGWLT EVMEAPTPVS
ALLHAGVINA GGFLLIRFAD VMLLAPGVMA LLVMLGGFTA LFGGLVMLTQ PAVKTSLAWS
TIAQMAFMMM QCGLALFPLA LLHIVAHSLY KAHAFLRSGE AVRNVAKIRR PGPVAVPSLR
NVAQAFLSAI AIYALVGLGL GFDGKSAQAI ALGVILIFGV AYLLAQGFAD EAPRALMRRT
VVYALATSLS YFALQVIAVS LTKGTLPATP APGPLEWALL VLALLSFGLV AIAQSTFPLW
ATHPAAAGLR VHLTNGLYAN AIFDKLLDGW SKRAAT
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