| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0831 |
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| Symbol | |
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| ID | 4077537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 872933 |
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| End bp | 873844 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006129 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612826 |
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| Protein GI | 99080672 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0434505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.363474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGA ACTATCATCA CTTGCGTTAT TTCTGGGCCG TCGCCCATGA CGGCAACCTC
ACGCGCACCG CGCAGCGATT GAACCTGTCG CAATCGGCGC TGTCGGTGCA GATCAAAAAC
CTTGAGGAGC GCCTTGGTCA CGCGCTCTTT GAACGCCGCG GCCGTCAGTT GCATCTTACT
GAAGCCGGTC GGATCACGCT CGATCATGCG GATGCGATTT TCTCGACAGG ACAAGAACTT
GTGGCGACGC TCACCGGCGC TGTCCAAGAG CGAAAGGCCC TGCGCGTGGG CGCGCTGGCA
ACCTTGTCCC GCAACTTCCA GATCGAGTTC CTACGCCCCA TGCTGGCACG GCAGGACGTG
GAAATCATCC TGCGATCCGG CAGCCCAACC GAGCTCCTAG AGGGGCTCTC GACCCTCAAT
CTCGATATGG TTCTGATGAA CAAACCTCCG CCAAATGACA GTTTGACGCG CTACGACACC
CATCAGATCG GGGAACAACA TGTCAGTATC GTCGGCACCC CGGCCCGACT GGATCCGACC
AAATCGCTTC GCGATCTTTT GGCAGAACAG CCCTTTATCG TGCCGACAAT GGACAACAGC
GTGCGCACGG CCTTTGATTC CCTGGCCAGC CGTATGTCGG TGCGCCCTCA GATCGCCGCA
GAGGTCGATG ACATGGCGAT GATGCGCCTG CTTGCCCGCG AGGACATCGG GCTCTCCTTG
GTGGCACCGA TCGTGGTGAA GGATGAACTA ACCTCGGGGC TTCTGAACGA GGCCAAGGAC
CATTTGCAGA TCAAAGAAAC CTTCTACGCG GTCACGTTGC GCCGACGTTT CCCCAATCCG
CTTGTCCAGG ATCTGATCAA GATCACTGCT GATCTCGCCC CCTTTGGCCG AGGAGACTCG
GAGCCATCCT AA
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| Protein sequence | MPLNYHHLRY FWAVAHDGNL TRTAQRLNLS QSALSVQIKN LEERLGHALF ERRGRQLHLT
EAGRITLDHA DAIFSTGQEL VATLTGAVQE RKALRVGALA TLSRNFQIEF LRPMLARQDV
EIILRSGSPT ELLEGLSTLN LDMVLMNKPP PNDSLTRYDT HQIGEQHVSI VGTPARLDPT
KSLRDLLAEQ PFIVPTMDNS VRTAFDSLAS RMSVRPQIAA EVDDMAMMRL LAREDIGLSL
VAPIVVKDEL TSGLLNEAKD HLQIKETFYA VTLRRRFPNP LVQDLIKITA DLAPFGRGDS
EPS
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