| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0801 |
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| Symbol | |
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| ID | 4076073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 848343 |
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| End bp | 849593 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006099 |
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| Product | hypothetical protein |
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| Protein accession | YP_612796 |
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| Protein GI | 99080642 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01547] phage terminase, large subunit, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.887797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000709779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCACACG ATCTGACGGT TAGCGCGCCG CAGGGTGTTT TCCTAAGCGG CCTCAACACC
AAGTTTCGCG CCTACGTTGG CGGGTTCGGG TCTGGCAAGA CCTATGTGGG GTGCCTCGAC
CTCGGCTTGT TTGCAGGGCA GCACCCCAAG ACGGTTCAGG GATATTTCGC CCCGACGTAT
CGGGACATTC GAGACACCTT CTGGCCAACC GTAGACGAGG CCGCGCATTC GCTGGGGTTC
ACGACCAAGG TCAAGAGCGC CGACAAGGAG GTCGAGTTCT ACCGGGGCCG CAGCTACTAC
GGCACCACCA TTTGCCGATC GATGGATGAT CCGGGCGGCA TTGTGGGCTT CAAGATCGCT
CGCGCCCTGG TCGATGAGAT CGACATTCTC AGCAAGGACA AGGCGCAAGC CGCCTGGCGT
AAGATCATCG CCCGGATGCG CCTGGTTCTC CCCGGCGTGG TCAACGGCAT CGGCGTCACC
ACCACCCCCG AGGGGTTCCG GTTCGTCTAT GACAGCTTCA AGCGGGAGCC AAAGAGCAAC
TATTCGATGG TGCAGGCCAG CACCTACGAG AACGAGGCGT TCCTGCCGCC AGACTACATT
TCAACCCTGC TGGAGGACTA CCCCGAGGAG CTGATTAAGG CCTACCTCAT GGGGGAGTTC
GTCAACCTCA CGAGCGGCAC CGTCTATCGC AGTTATGACC GGTTGCGGCA TCGATCAACA
CAGAGCATCC AGCCGCGGGA GCCGCTGCAC ATTGGGCAGG ACTTCAATGT TGGCAACATG
GCCTCGGTGG TTTTCGTCCA GCGCGGCGAA GATTGGCACG CGGTCGATGA GCTGCAGGGG
CTGCAGGACA CGCCGCATCT GATCGAGGTT CTATGCGACC GATACGAGGG GCACCACCTC
ACGATCTACC CCGACGCCAG CGGTAGCAGC CGCAAGACTG TCAATGCCAG CACGTCGGAT
ATTGAGCTTC TGCGGAAAGC GGGTCACGCG ATCCGGGCGC CTAGCACCAA CCCGGCGGTG
AAAGACCGGA TCCTCGCAGT GAATACGGCC TTCGAGAATG GCCGCCTCTT TGTGAACGCT
CTCCGCTGCA AAGCCTACGC CGAAGCGCTT GAACAGCAGG CATATGACAA GAACGGCGAG
CCGGACAAAT CCGCCGGTCT CGACCACCAC CCAGACGCGG GCGGCTATTT CGTCCACCAG
AAAATGCCGG TCGTGAAACC GACCTTCACC CGGCAGGAGC TTCGCCTTTG A
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| Protein sequence | MSHDLTVSAP QGVFLSGLNT KFRAYVGGFG SGKTYVGCLD LGLFAGQHPK TVQGYFAPTY
RDIRDTFWPT VDEAAHSLGF TTKVKSADKE VEFYRGRSYY GTTICRSMDD PGGIVGFKIA
RALVDEIDIL SKDKAQAAWR KIIARMRLVL PGVVNGIGVT TTPEGFRFVY DSFKREPKSN
YSMVQASTYE NEAFLPPDYI STLLEDYPEE LIKAYLMGEF VNLTSGTVYR SYDRLRHRST
QSIQPREPLH IGQDFNVGNM ASVVFVQRGE DWHAVDELQG LQDTPHLIEV LCDRYEGHHL
TIYPDASGSS RKTVNASTSD IELLRKAGHA IRAPSTNPAV KDRILAVNTA FENGRLFVNA
LRCKAYAEAL EQQAYDKNGE PDKSAGLDHH PDAGGYFVHQ KMPVVKPTFT RQELRL
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