| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0789 |
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| Symbol | |
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| ID | 4076061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 841219 |
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| End bp | 841935 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638006087 |
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| Product | putative phage repressor |
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| Protein accession | YP_612784 |
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| Protein GI | 99080630 |
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| COG category | [K] Transcription |
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| COG ID | [COG2932] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000233571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCCTT ATAGGGACAA TACTCCCCAT CTTGCAAGGG ACAATCATCT CCTATTCACG
GAATTGGCTA GGGACTATTG TCTCTCCATG CCAATTTCTT TCAAAGAAGC CCTAGACCGC
GCACAGGATG CCACCGGCCT CTCCATGAGG AAGCTGGCTG ATAAGGCAGG TGTTTCTTAC
GAGCAGCTCA AAAAAGTTCG GCAAGGGAAA AGCCAAACGA CCAACGCCGA GGACGCCCTA
AAAATCGCTA CAGCGGTAGG CGTCTCTTTC GAGCAGTTTA TGTCCGGAGA GTTTGATGCA
TCGCCCACCA TTTCGATCGC GGGGAAAGTA GGTGCTGGCG CCCAGGTACC GGTGTTCGAC
GCCTACGAGA AAGGCGATGG CCCACAGGTC GAATGTCCAC CGGGCATTGG GCCGCACGGC
GTTGTAGCAG TCGAGGTCGA GGGTGACAGC ATGGAGCCGG TATATTCCGC CGGGGATCTA
CTGTTCTACT CTCGCAATGG GCATGACAGC GTTCCTGACG ACGTGATCGG CTACAAGTGC
GTTTGCGAGG ATGCGGACGG CATGGGCTGG GTGAAGCAAG TCAAAGCGGG TGATGAGCCG
GGGCTGTTCC ACCTGATCTC GCTCAACCCC ACCGGTGCAA ACATGTGGAA CGTGCGCCTA
AAGTGGGCCG CCCGCGTGCG ACTGCACTGG CCTGCGGAGT TTGCGAGGAA GAAATAG
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| Protein sequence | MTPYRDNTPH LARDNHLLFT ELARDYCLSM PISFKEALDR AQDATGLSMR KLADKAGVSY
EQLKKVRQGK SQTTNAEDAL KIATAVGVSF EQFMSGEFDA SPTISIAGKV GAGAQVPVFD
AYEKGDGPQV ECPPGIGPHG VVAVEVEGDS MEPVYSAGDL LFYSRNGHDS VPDDVIGYKC
VCEDADGMGW VKQVKAGDEP GLFHLISLNP TGANMWNVRL KWAARVRLHW PAEFARKK
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