| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0784 |
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| Symbol | |
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| ID | 4076056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 837950 |
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| End bp | 838672 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006082 |
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| Product | ERF |
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| Protein accession | YP_612779 |
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| Protein GI | 99080625 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00235898 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGAAG TGACGCAGAT CCGCCATCAA GATGACCAGC TTCCGGCTGA CCCGATGGTA
TCCATGATCG AGCGGGTTGC TACGGACCCG AATGCAGACA TCGACAAGCT GGAAAGAATG
CTTGAGATGA AAGAGCGCCA CGACGCGCAG AACGCGAAGG CCGCGTTTTC CTCTGCCTTT
GCCCGCGCCT CTGCCGAGTT CCCAACGATC CCGCTGAACG GCAAGGGCCA CAACAACAAA
CCATACGCCA CCCTTGAGGA TATCACCAAG CTCACGCGCC CGGTTCTGTC CAAGCACGGC
CTTGCGCTGA CCTTCTCTGT CGACGTTGGG GATCAGGTCG TCGTGACTGC TAAACTGATG
CATGAGCAAG GCCACTCCGA AAGCACCAGC ATGGCGCTGC CCCGTGATAC CAGCGGCAGC
AAGAACGCGG TGCAGGCGGT CGGCTCAACT CAGAAATACG GGCAGCGGTA CACCGCGCAA
GCGATCCTTG GCCTGTCGCT CGGCATGGAT GATGAGGACG ATGGAGCAGG CGCGACTGGT
CGCGAAACGA TCACGCCAAC CCAGATCGAG GAATTGCGCA GGCTGATCGA AAAGGCTGGC
GTGACGCCGG AAACTGTCTG CACGGCTGCA AAGGTCGCGG ATCTGTCCAG CATAGCAGTC
GCCGACTTCC AGCCGCTCAC CAAGAAGCTC AACGCCACGA TCAAAGCGAA GGAGGCGAAG
TAA
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| Protein sequence | MNEVTQIRHQ DDQLPADPMV SMIERVATDP NADIDKLERM LEMKERHDAQ NAKAAFSSAF
ARASAEFPTI PLNGKGHNNK PYATLEDITK LTRPVLSKHG LALTFSVDVG DQVVVTAKLM
HEQGHSESTS MALPRDTSGS KNAVQAVGST QKYGQRYTAQ AILGLSLGMD DEDDGAGATG
RETITPTQIE ELRRLIEKAG VTPETVCTAA KVADLSSIAV ADFQPLTKKL NATIKAKEAK
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