Gene TM1040_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0781 
Symbol 
ID4078093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp836465 
End bp836770 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content61% 
IMG OID638006079 
Producthypothetical protein 
Protein accessionYP_612776 
Protein GI99080622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA GCGGCCCGAA GATGACCAAG CTGCGCACCG CCGCGAAAGG TCAGCCCTGC 
ACACTCCGCC TGCCCTGCTG CAACAACAAC CCTGAGACCA CTAGCCTTTG CCACATCCGC
GCATTTGGCT GGGCCGGAAC ATCTGAGAAG CCAATGGATT TCCTCGCGGT CTTCGCCTGC
TCTGACTGCC ACGATGCCTT GGACCGGCGC AGAAACGGCG AGCTTTGGGG ATGGGATGAT
GTGACCCGCG CCCTTGGGGA AACCCTTATC GCACAACACC GCATGGGCAA CCTGATCGTT
GCTTGA
 
Protein sequence
MKASGPKMTK LRTAAKGQPC TLRLPCCNNN PETTSLCHIR AFGWAGTSEK PMDFLAVFAC 
SDCHDALDRR RNGELWGWDD VTRALGETLI AQHRMGNLIV A