| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0776 |
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| Symbol | |
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| ID | 4078088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 832173 |
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| End bp | 833177 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006074 |
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| Product | phage integrase |
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| Protein accession | YP_612771 |
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| Protein GI | 99080617 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.228831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0322595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACA TCAGCATCGG ACGTTTCAGG GGCGGATTCT GCGTCTATTG GCATGAAGGT
GGCAAGCGAA GACGTTATAG CCTTAAGGCA CGCACCCGAG AGGAAGCCGA GCCAGAAGCG
ATAGATGTCT ACCGGCGCGA GACACTCGAC CAACGCCGGG GAAGAGACAC GGTTGCTGAC
ATCTGGGAGG CTTACCGCCA AGACCTTGGA GAAAAGCCCA CAGCCAAGAC GATGGGCTAT
ACTGGGAAGG CTGTTCTCGC TCACTTCGGT GCATATCGGC CCGATCAGAT CACCACGTCC
CTCTGCCGCA AGTATGTGAC CAATCGCACT GCCGAGGGTA AATCGCAGGG CACCATTCAC
ACGGAACTAG GCCACCTTCG CAGCGCAATG CGCTTTGCCG TGAAGGAGCG GATCATCGAC
AAGGCCCCAT CCATCGAGCG CCCGGCCAAG CCGACGCCAA AAGAACGGTA TCTCGAAAAG
GAAGAAATCG CGGCCCTGAT CGACGCGGCA TCCGCGCCAC ATATCGCCCT AGCTATCCAC
CTGCTCTTCG CAACTGCCGG GCGGATCGGT GCCGTTCTGG ACCTGACATG GGACCGGGTA
GACTTCCAGC GCGGGATCAT CAATCTGCGC CTTGACGACT CGAAGACCCG CAAGGGCCGT
GCCATTGTCC CGATGAACTC CGGGATCCGG GCCGCGCTCC AAACCGCTCA TGACGCCGCA
CTCAGCGACT ATGTGGTCGA ATATGCTGGC GGCAAGGTGA AGAACATTCG GAAAGGGTTT
GAGGCGGCCT GCCGTAGAGC CGAACTTGAC GGAGTGACCC TGCACACGAT TCGGCATTCC
AGCGCGGTTG CTATGGTATC AAACGGCGTT CCGCTGGAGA AAGTTGCGCA GTACCTAGGG
CACTCCAATG TTGCCATCAC CTACCAGACG TACGCGAGAT TCGCGCCCGA TCACCTGCAG
GATGCAGCTG AGATCCTGGA CTTCGTTCAA ATCAGGGAGG CATGA
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| Protein sequence | MPDISIGRFR GGFCVYWHEG GKRRRYSLKA RTREEAEPEA IDVYRRETLD QRRGRDTVAD
IWEAYRQDLG EKPTAKTMGY TGKAVLAHFG AYRPDQITTS LCRKYVTNRT AEGKSQGTIH
TELGHLRSAM RFAVKERIID KAPSIERPAK PTPKERYLEK EEIAALIDAA SAPHIALAIH
LLFATAGRIG AVLDLTWDRV DFQRGIINLR LDDSKTRKGR AIVPMNSGIR AALQTAHDAA
LSDYVVEYAG GKVKNIRKGF EAACRRAELD GVTLHTIRHS SAVAMVSNGV PLEKVAQYLG
HSNVAITYQT YARFAPDHLQ DAAEILDFVQ IREA
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