| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0766 |
|---|
| Symbol | |
|---|
| ID | 4078078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 822118 |
|---|
| End bp | 822480 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638006063 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_612761 |
|---|
| Protein GI | 99080607 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
|---|
| TIGRFAM ID | [TIGR02945] FeS assembly SUF system protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.36517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.611735 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG CTTCCGAACC GCTTGAAGGC ACTCCGCTGA TTGCGCCCTC CTCCGTGTCC
CACGCGCTCT ATGAGCCAGT GGTTGATGCC TGCCGTACTG TTTTTGACCC AGAGATCCCG
GTCAACATCT ATGATCTTGG GCTGATCTAC ACTGTTGAAA TTTCTGATGA AAACGACGTC
AAAATCATCA TGACCCTGAC CGCCCCTGGC TGTCCGGTGG CAGGCGATAT GCCCGGCTGG
ATCGTCGATG CGGTCTCGCC CGTGCCCGGT GTCAAAAGCG TCGATGTGGA ACTCACCTGG
GAACCGCCCT GGGGCATGGA CATGATGTCG GATGAAGCCC GACTGGAACT CGGGTTCATG
TAA
|
|---|
| Protein sequence | MTDASEPLEG TPLIAPSSVS HALYEPVVDA CRTVFDPEIP VNIYDLGLIY TVEISDENDV
KIIMTLTAPG CPVAGDMPGW IVDAVSPVPG VKSVDVELTW EPPWGMDMMS DEARLELGFM
|
|---|
| |