| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0764 |
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| Symbol | |
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| ID | 4078076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 820756 |
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| End bp | 821496 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006061 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_612759 |
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| Protein GI | 99080605 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.641907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGCA AACTCGCGGC AGGCAACTGG AAAATGAACG GCACCGGCGA GCACCTCGCC
GAACTTGAAA ACCTTGCACA GGGTGATCTG CCGGAGGGCG TCGATGTGCT GATCTGCCCG
CCCGCAACGC TCATCTCGCG CGCGGCCGAC CGTGCCGGTG ACATCGCAAT TGGCGGGCAG
GATTGCCACG CAAAGACGTC TGGCGCACAT ACTGGCGATC TGAGCGCTGA CATGCTTCGG
GATGCGGGGG CAACCTATGT GATCATTGGC CACTCGGAAC GCCGCGCCGA TCACGGCGAA
GGAGACGCGG ATGTGCGCGC CAAGACCGAG GCCGCTCAGG CTGCGGGCCT TGTGGCCGTG
GTTTGCATCG GTGAAACGCT CGAGGAGCGC GAGGCTGGCA CCACCCTAGA GGTGGTTGGC
GCGCAGCTCG CGGGCTCCCT GCCCGATGGT GTCACGGCGG AGAACACAGT TGTCGCCTAT
GAACCCGTCT GGGCCATCGG CACAGGCAAG GTTCCCACGC TCGATCAGAT CGCTGAGGTG
CATGACGCTC TGCGTGCAGA TCTGGTGGCG CGCTTTGGTG CAGCGGGCAA GGACCTGCCA
CTGCTCTATG GTGGTTCCGT GAAACCAGGC AATGCAGCCG AGATCTTTGG GGTTTCCAAC
GTCGATGGCG CGCTTGTGGG TGGCGCCAGC CTAAAGGCTG CGGACTTCGG CCCCATCATT
GCGGCCCTCG CCGCAAGCTG A
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| Protein sequence | MARKLAAGNW KMNGTGEHLA ELENLAQGDL PEGVDVLICP PATLISRAAD RAGDIAIGGQ
DCHAKTSGAH TGDLSADMLR DAGATYVIIG HSERRADHGE GDADVRAKTE AAQAAGLVAV
VCIGETLEER EAGTTLEVVG AQLAGSLPDG VTAENTVVAY EPVWAIGTGK VPTLDQIAEV
HDALRADLVA RFGAAGKDLP LLYGGSVKPG NAAEIFGVSN VDGALVGGAS LKAADFGPII
AALAAS
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