| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0735 |
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| Symbol | |
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| ID | 4076105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 792161 |
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| End bp | 793741 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006032 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_612730 |
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| Protein GI | 99080576 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAAGAT TGGAAAAATT GCATACCACC TATGCGCAGA ACGCAGGGTT AAACATGACT
GAGAAACGCA TCATTCCCGG GCTTACCGCC ACAGGCGGGT GGGACATCCC CGAGCGGCTC
AATATGGCGG CGCAGGCGAT GGATCACCCG GCCGATAAAC TCGCGATCAT TGACCTCACC
TCCGGGACCC GCCGTGATGT GTTTCATCGG GAATTGGCCG TAATGGTCGA TGGTCTGGCG
CGCACATTGC TGCAACGTGT CGCCCCCGGT GATCGCGTCG GAGTGCTCTT GTCGCAATCA
CCTTGGTGTG TGGCGGCGCA TCTGGCGATC TGGAAAATTG GCGCAGTCTC GGTGCCGCTA
TTTAAACTGT TTCAGCACGA CGCCCTTGCC AACCGCGTCG AGGATGCAGG TGCGAAGTAT
GTGCTGACCG ATCGGGAGGG CGCGGCGCAG CTTGGCGATT TGGCCGAGCC GCTGATTACG
GCAGAGATCG GCGTCGAGGG CGATCCGGTG CCCTTCGCCG ACACTGGATC CGAGGACCCG
GCGGTCATTA TCTATACCTC CGGTACCACG GGCAAACCCA AGGGAGTCTT GCACGGGCAC
CGGATGCTGA CAGGGCATCT GCCGGGCGTG TCGATCAGTC ACGACCATCT TGGCCAGCCC
GGTGATTGTC TCTGGACGCC TGCGGATTGG GCGTGGATCG GCGGGCTCTT TGATGTCGCA
ATGCCGGGCC TTGCGCTGGG TGTGCCGGTC GTCGCCGCGC GGCTTGATAA GTTTACGCCT
GAAACCTGCG CCGAGGTGAT GCGCTTGGGC GAGGTGCGCA ACGTCTTCTT TCCGCCTACC
GCCCTGCGCA TGCTAAAAGC AGCGGGGCAG GGGCTCGACG GTTTGCGTTC CGTGGCCTCC
GGCGGAGAGC CCCTGGGCGC GGAGATGCTC GCCTGGGGCC AGCGTCACCT GGGCGTCACC
ATCAACGAAT TCTACGGCCA GACCGAATGC AACATGACGG TGTCCTCTTG CTGCGCGGAC
TTCCCCGTGC GCCCTGGCTG CATCGGGAAA CCGGTGCCGG GGCATGTGGT CGAGGTGATC
GACGCAGACG GCCAGCCCAC CCGTGAGGAA GGCGATGTGG CGGTGCGCCG TGGTTCCGGG
TCGATGATGC TGGAATATTG GAACCGCCCC GACGCCACCG CCGAGAAGTT TCACGGCGAC
TGGCTGGTGA CCGGGGATCG CGGCATCTGG GAGGCGGGCT ATCTGCGCTT CGTGGGGCGT
GAGGATGACG TGATCACCTC TGCCGGTTAC CGCATCGGCC CCTCCGAGAT CGAGGATTGT
CTGATGACTC ACCCGGCCGT TGCCACCGTC GGTGTGGTCG GCAAGCCCGA CGCCCTGCGC
ACTGAGATCG TCAAGGCCTA TGTGGTGCTG AAACCGGACC ACGCCCCAAG CGAAAAAGAG
CTGCAGGATT ACGTCAAAGA GCGCCTTGCC AGCTATTCCT ATCCCCGCGA GATCGCCTTT
CTCGACGCTT TGCCGATGAC GGTTACGGGC AAGGTGATCC GTAAAGAACT CAAGGCGCGG
GCTGCGGGGG AGGGGAAGTG A
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| Protein sequence | MERLEKLHTT YAQNAGLNMT EKRIIPGLTA TGGWDIPERL NMAAQAMDHP ADKLAIIDLT
SGTRRDVFHR ELAVMVDGLA RTLLQRVAPG DRVGVLLSQS PWCVAAHLAI WKIGAVSVPL
FKLFQHDALA NRVEDAGAKY VLTDREGAAQ LGDLAEPLIT AEIGVEGDPV PFADTGSEDP
AVIIYTSGTT GKPKGVLHGH RMLTGHLPGV SISHDHLGQP GDCLWTPADW AWIGGLFDVA
MPGLALGVPV VAARLDKFTP ETCAEVMRLG EVRNVFFPPT ALRMLKAAGQ GLDGLRSVAS
GGEPLGAEML AWGQRHLGVT INEFYGQTEC NMTVSSCCAD FPVRPGCIGK PVPGHVVEVI
DADGQPTREE GDVAVRRGSG SMMLEYWNRP DATAEKFHGD WLVTGDRGIW EAGYLRFVGR
EDDVITSAGY RIGPSEIEDC LMTHPAVATV GVVGKPDALR TEIVKAYVVL KPDHAPSEKE
LQDYVKERLA SYSYPREIAF LDALPMTVTG KVIRKELKAR AAGEGK
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