| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0713 |
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| Symbol | |
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| ID | 4076990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 767742 |
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| End bp | 768734 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006010 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612708 |
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| Protein GI | 99080554 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.409479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG CTGCAAAAGA AAAGACCCTG CAGCACTCCA GCGTGCAGGA CGAACTCGCC
ACACCCGCCC GCAGCCAGTG GCGCGAGATC TGGGTTCAGT TCAAATCGCA CCGAGGCGCA
TTGTTCGGGG GCTGCCTGTT CCTGTTCATC GTGCTGGGCG TGGTGGTTGG CCCGTTCATC
TACTGGAATG ATGCCAAGTT CGTACCCACG GGCCGTGACT TCATCACGTT GCGGGACATG
CGTCCGATCT ATCACGCGCT GTGGGACCCC TCGGCCAAGA TGGACTGGGC CTATCCGCTC
GGGACCGACA ACCTTGGCCG TGACACGTTG GCGCGTCTGA TGTTTGGCGG TCGTGTGTCG
CTTGCCGTGG GCATGGCGGC GATGATCCTC GCGCTGATCC TCGGCAGCCT GATCGGGGTG
CTGGCGGGCT ACTTCAAAAA GCTCGACGGC CTCCTGATGC GGATGACTGA TCTGTTTCTC
GCCCTGCCCC TCTTGCCGAT GATCCTCGTC GCAGCGGTGT TGTTTCGCGA GAGCCTGTCG
AAAACCATCG GCCCAGAAGG CGGCATCTTT GTACTGATCG TCTGTCTGAT CGGGATCACC
TCCTGGATGC CGACCGCACG GATCGTGCGC GGCGACGTGC TGGCGATCAA GGAACGCGAG
TTCGTGCTGG CGGCCCGTTC CATCGGGACC AAGCCCGGCA ATATCATCTC GCGTCACATC
CTGCCGAACG TGCTCTCGCC CATCATGGTG TCGGCCACCT TGGGGATCGC CACCGCGATC
ATCACCGAAT CGGCGCTGTC CTTCCTCGGC TTTGGCTTCC CGCCGGACTT CCCGACCTGG
GGCCGCCTGC TGAATGATGC CGTGGACCGG ATGACCCTCT TCCCCGAGCG CGTGCTTTGG
CCCGGCATCC TGATCTCGCT GACGGTTCTG TCGGTAAACT ATCTGGGTGA CGGTCTGCGC
GACGCGCTGG ACCCGCGTAT CCGGGGCCGC TGA
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| Protein sequence | MTDAAKEKTL QHSSVQDELA TPARSQWREI WVQFKSHRGA LFGGCLFLFI VLGVVVGPFI
YWNDAKFVPT GRDFITLRDM RPIYHALWDP SAKMDWAYPL GTDNLGRDTL ARLMFGGRVS
LAVGMAAMIL ALILGSLIGV LAGYFKKLDG LLMRMTDLFL ALPLLPMILV AAVLFRESLS
KTIGPEGGIF VLIVCLIGIT SWMPTARIVR GDVLAIKERE FVLAARSIGT KPGNIISRHI
LPNVLSPIMV SATLGIATAI ITESALSFLG FGFPPDFPTW GRLLNDAVDR MTLFPERVLW
PGILISLTVL SVNYLGDGLR DALDPRIRGR
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