| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0698 |
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| Symbol | |
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| ID | 4077365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 748019 |
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| End bp | 748678 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005995 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_612693 |
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| Protein GI | 99080539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.228611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0160033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCGTT TTTTGATTCT TTTTGTGCTG TTGGTCGCCG GCTGTACCGG CGTTGACCCC
AACAACCCGC AATACCGTGC GTTTGTTGCG GTTGCAGAGG ATGTGGAACC CGTTGGCGAG
GCGCAGTGCC GCAGCAAGGA CCCCGAGCGC AACTGCGATT TTCAGATCCA GCTGGATCTC
AATCCCTCCG CCCCCGCAAA CGCCTTTCAG ACGGTCGATC GCAGTGGACG ACCTGTGGTG
ATCTTCACGC GCAGCATGCT CGATAGTTTT CGCAATCCTG ACGAGATGGC GTTTGTGATG
GGGCACGAGA TGGCGCATCA CATTCTCGAG CATCTCGACC AGCAGCGGAT CAATGCGGTC
AAAGGTGCGG TCTTTCTGGG CGAGTTGGTA TCGCTCGAGG GAGGCACGCC CGAACAGGTC
GCCAACGCGC AATATGTCGG CGCCGTGGTT GGCTCGCGCA GCTATTCCAA AGCGTTCGAG
TTGGAGGCGG ATGCGCTTGG AACGCTCATC ACCTATCAGG CGGGGTATCG CCCCAGCGTC
GGGGTGAAGT TCTTCGAAGA GATCCCGGAC CCGGGAGATG TATTCCTTGG CACCCATCCG
GCCAATCCCG ACCGCATCCG TATCGTGCAA AGAACGATCC GCAAATACGG TTTGAACTGA
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| Protein sequence | MRRFLILFVL LVAGCTGVDP NNPQYRAFVA VAEDVEPVGE AQCRSKDPER NCDFQIQLDL
NPSAPANAFQ TVDRSGRPVV IFTRSMLDSF RNPDEMAFVM GHEMAHHILE HLDQQRINAV
KGAVFLGELV SLEGGTPEQV ANAQYVGAVV GSRSYSKAFE LEADALGTLI TYQAGYRPSV
GVKFFEEIPD PGDVFLGTHP ANPDRIRIVQ RTIRKYGLN
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