| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0676 |
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| Symbol | |
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| ID | 4077284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 722497 |
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| End bp | 723462 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005973 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612671 |
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| Protein GI | 99080517 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0955164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATGA AAGGCGTCAC GCTCAGAGGG CTTGAAGTTT TTGAAGCTTT GGCCAAATCG
GGTTCTGTCG CGCAGGCTGC AGATATTACC GGACTCAGCC AGCCCGCCGT GAGTCAGCAA
CTTCGAAATC TCGAAAAGGC GCTTGGATCG GATCTGGTCG ATCATGGACG GCGCCCAATG
GTGCTGACCT CTGCCGGACG CAGCTTTCTG TCGCGCACCC AAGCGATCCT GAGCGAGCTG
CGCCTCGCCC AAAGCGAACT CACCGTGATG GATCTGTCAC ATTTGCCGGC GCTGTCGATT
GGGTTGATTG ACGATTTTGA CAATGACCTG ACACCGCGCC TTGCGACCAT TCTGGCGGAC
AGTCTCACGC AGTGCCGTTT CAAGATGGTC ACAGCCTCCA GCCATGACAT CCATAGAGCC
ATGGCTGAAA AGGATCTGCA CATCGGCGTT GCGGCATCAA CCGGCGAACT TCGCACAGGT
GTGACCGAAT ATCCGCTGGT GGAAGAGCCC TTTATCCTGG TGGCCCCGCG GGGCTGCATA
ACCGATCCCG ACGATGTCGG GAACCAGCTC AATCACCTGC CGCTGCTGCG CTACGCGCGG
GATCAGCTGA TCTCGCAGCA GATCGAGTCG CATCTCAGCC GCAACAAGAT GGAATTTGAC
GACCGTTTCG AGATCGGCTC ACATCTTGCG CTGATGGCCA TGGTGGCACG CCGGATCGGT
TGGGCCATTA CGACTCCGCT GGGCTACATG CGGGCCGTGC GCTTCCATGA GGACATCGAC
GCATACGCGC TCCCATTTGC CGGGTTCTCG CGTCGCATTT CACTCTTTGC ACAGTCCGAT
TGGCCGGACA CTGTCCCGCT TGAGGTGGCA GGCACGGTGC GTCGACTGAC CCAGAGCCAG
ATGATCACCC CAGCCATCAA CCGCCTGCCT TGGCTTGCCG GACAACTGCG CGTCATCGAA
GAGTGA
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| Protein sequence | MLMKGVTLRG LEVFEALAKS GSVAQAADIT GLSQPAVSQQ LRNLEKALGS DLVDHGRRPM
VLTSAGRSFL SRTQAILSEL RLAQSELTVM DLSHLPALSI GLIDDFDNDL TPRLATILAD
SLTQCRFKMV TASSHDIHRA MAEKDLHIGV AASTGELRTG VTEYPLVEEP FILVAPRGCI
TDPDDVGNQL NHLPLLRYAR DQLISQQIES HLSRNKMEFD DRFEIGSHLA LMAMVARRIG
WAITTPLGYM RAVRFHEDID AYALPFAGFS RRISLFAQSD WPDTVPLEVA GTVRRLTQSQ
MITPAINRLP WLAGQLRVIE E
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