| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0666 |
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| Symbol | |
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| ID | 4077274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 712251 |
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| End bp | 713177 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005963 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_612661 |
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| Protein GI | 99080507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.829817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATT TCCTCGATAT CCATAAAACC GCACCCGAAG ATCTGCGTCA GATCATTGAT
CAGGCCGGGC AAATGAAAAC CGCACGTCTT GGCCGCCCCA AAGGCACGCC AGATGACGAG
CAGCCGCTTG CAGGGCATAT GGTTGCGCTG ATCTTTGAAA AGCCCTCGAC CCGGACGCGG
GTTTCTTTTG ATGTCGGGGT GCGCCAGATG GGCGGCGAAA CCATGGTGCT CTCCGGCAAG
GACATGCAGC TTGGTCACGG CGAGACCATC GCTGACACCG CGCGGGTGCT GTCGCGCTAT
GTGGACATGA TCATGATCCG GACTTTCGAC GAAACCGTGC TTACCGAGAT GGCAGAATAT
GCCGATGTGC CGGTGATCAA CGGTCTTACC GACCGCACCC ACCCCTGTCA GATCATGGCC
GATATCCTCA CCTATGAAGA ACACCGCGGC CCCATCAAGG GCAAGAAGGT GGTCTGGACC
GGGGACGGAA ACAATGTTTG CGCGTCTTTT CTCCACGCGG CGGGTCAGTT CGGCTTCGAC
CTTACCTTTA CTGGTCCGGC GCAGCTTGAC CCGGAAGATG AATTCATCGG GTTTGCGCGC
AACGCGGGCT CCAAGATCAC TATCGAGCGG GATGCGGCGA AGGCCGTTGA GGGCGCGGAT
CTGGTGGTGG CCGACACTTG GGTGTCGATG CATGACAGCC AATCCTCGAA GGAGCGGCGC
CACAACATGC TGCGTCCCTA TCAGGTCAAC GACGCGTTGA TGGCGCATGC CAAGCCGGAC
GCGCTCTTTA TGCATTGCCT GCCAGCGCAC CGCGAGGAAG AGGTGACCTC GGCAGTGATG
GATGGCCCCC AGTCGGTGAT TTTTGACGAA GCCGAAAATC GCCTGCACGC GCAAAAGGCG
GTCATGCGCT GGTGTCTGGG CGTCTGA
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| Protein sequence | MNHFLDIHKT APEDLRQIID QAGQMKTARL GRPKGTPDDE QPLAGHMVAL IFEKPSTRTR
VSFDVGVRQM GGETMVLSGK DMQLGHGETI ADTARVLSRY VDMIMIRTFD ETVLTEMAEY
ADVPVINGLT DRTHPCQIMA DILTYEEHRG PIKGKKVVWT GDGNNVCASF LHAAGQFGFD
LTFTGPAQLD PEDEFIGFAR NAGSKITIER DAAKAVEGAD LVVADTWVSM HDSQSSKERR
HNMLRPYQVN DALMAHAKPD ALFMHCLPAH REEEVTSAVM DGPQSVIFDE AENRLHAQKA
VMRWCLGV
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