| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0663 |
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| Symbol | |
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| ID | 4078176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 708878 |
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| End bp | 709702 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005960 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_612658 |
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| Protein GI | 99080504 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA ACAACGCACA GTCGAGCTTT CGGATCGAAG TGGGAGAACG CCGCTTTGGC
AGAGTGAATT GGCTGGGTCT TCAGACGCTT GCCGGGCGCG AGATCAAACG CTTTATGGTG
GTCTATACCC AGACCTTGCT GGCGCCGATG GTGACGGCGG CGCTGTTCCT GTTGATCTTC
TCGATCGCAA TTGGCCCACG ACGCGGCGAT GTCATGGGCG TGCCTTTCAT TTCCTTTATC
GCACCGGGCA TCATGATGAT GACCGTGATC CAGAACGCCT TTGCCAACAC GTCCTCGTCG
CTGGTGATCT CCAAAGTGCA GGGCAACATC GTCGACACGC TGATGCCACC GCTTTCCGGT
TTCGAGATCC TCCTTGGGTA TCTTGCGGGG GCGATCACAC GCGGGCTGTT CGTCTCTGTC
GGGATTGGTC TCGGGCTGGC TCTGGTGCTG GGCATGGTGC CGGCGCATCC GCTCGTGGCG
CTGGGCTTTG TGGTTCTGGG GGCAGCGTTT CTCGGGGGGC TTGGCATCGT CGCTGGCGTA
TTTGCCGACA AATTCGACCA GATGGCGGCC ATCACCAATT TTGTGGTGAC GCCATTGGCG
TTTCTGTCCG GCACGTTCTA CTCAGTCGAA GCCCTACCAC CGGTGCTCTA CGCGATCTCC
CATGTGAACC CGGTTTTCTA CCTGATCGAC GGGGTGCGAT ATGGCATGAT CGGCGTCTCC
GACAGCGACC CGGCCTTTGG CGCGCTAGTG TGCCTTGGGG CGACGGCTGT CATATTGCTG
CTGGCCTGGC AGATGCTTCG GACAGGCTAC CGGCTGAAGA ACTAG
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| Protein sequence | MSDNNAQSSF RIEVGERRFG RVNWLGLQTL AGREIKRFMV VYTQTLLAPM VTAALFLLIF
SIAIGPRRGD VMGVPFISFI APGIMMMTVI QNAFANTSSS LVISKVQGNI VDTLMPPLSG
FEILLGYLAG AITRGLFVSV GIGLGLALVL GMVPAHPLVA LGFVVLGAAF LGGLGIVAGV
FADKFDQMAA ITNFVVTPLA FLSGTFYSVE ALPPVLYAIS HVNPVFYLID GVRYGMIGVS
DSDPAFGALV CLGATAVILL LAWQMLRTGY RLKN
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