| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0648 |
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| Symbol | |
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| ID | 4078161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 691865 |
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| End bp | 693112 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005945 |
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| Product | peptidase T |
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| Protein accession | YP_612643 |
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| Protein GI | 99080489 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.60889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA GCTTTGACAA CACCCTTCAA TCCCGTCTCG TGCGCTATGC TGCCATCGAC
AGCCAGAGCG ATGAGAATTC CCCCACGGCA CCCAGCACCA AGATCCAGTT TGATATGTTG
CACTTGGTGC GCGACGAGTT GACCGAGATC GGAGCGCAAG ACGTGCAGCT GACCGATTAC
GGCGTTGTTC TGGCGACTAT CCCCGGCAGG TCGGAGGCCC CCACAGTGGG CTTCCTCGCC
CATGTCGACA CTGCCCCGCA GTTCAATGCC ACCGGTGTGA AACCTCGTGT GATCAAAGGG
TACAATGGCG GCGAGATCAG CTTTCCCGAT GATCCGGAGC TGGTGCTCTC TCCCGAGGCG
CACCCCTATC TGGCCGAGAA AATCGGCCAT GATCTGATCA CTGCGTCTGG CACCACATTG
CTTGGGGCGG ACGACAAGGC GGGGGTTGCG ATCATAATGA CGATGGCAGA GCACCTGCTG
CAAAACCCGG ATGCCGCCCG TCCAACAATC CGGATTGCCT TCACTCCGGA CGAAGAGATC
GGTCGCGGCG TGCAACCCCA GCTGGAGCGC GACCTCGGGG CGGATTTTGC CTATACGCTC
GATGGCGGGG AACTCGGCGA AGTGGAGTAC GAGAGCTTTT CGGCCGACCG CGCAGTTGTC
AAAATCACCG GCGTTTCCAT TCACCCGGGC CTCGCCAAGG AAAAGATGGT CAATGCCATC
CATCTTGCCT CCAAGATCAT CCAGACGCTG CCTCAGGCCA CGATGACGCC CGAGACAACA
GCGGACCGCG AGGGGTTCAT CCATGCCACC GACATGTTCG GGGGGTCTTC CGAGATGGAG
ATCCGCTTCA TCCTGCGCGA TTTTGAAATG GCCGATCTTG AGGCCAAGGG CGCCCTTCTA
CGCAGCGTCT GCGAGGCGGT TGCGGCAACC GAACCGCGCG CGGAGATCAC CTGCGAGATT
ACCCCGCAAT ATCGCAACAT GCGGTATTGG CTTGAAAAGG ACATGACCCC TGTCGATCTC
GCCCATGCCG CCTGCCGCGA TGTGGGACTG GAGCCGGTAT CGGTTCCGAT CCGCGGGGGC
ACCGATGGGT CTCGCCTGAC CGAATTCGGC ACGCCGACGC CCAATATCTT TACGGGGATG
CAATGCATTC ATGGCCCCTT GGAGTGGATC TCGGTTCAGG ATATGTCGCT GGCAACGCAG
ATGTGTCTGA GCCTCGCGGC GCGCGCCGCA ACGCTCGACA AGACCTAA
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| Protein sequence | MTDSFDNTLQ SRLVRYAAID SQSDENSPTA PSTKIQFDML HLVRDELTEI GAQDVQLTDY
GVVLATIPGR SEAPTVGFLA HVDTAPQFNA TGVKPRVIKG YNGGEISFPD DPELVLSPEA
HPYLAEKIGH DLITASGTTL LGADDKAGVA IIMTMAEHLL QNPDAARPTI RIAFTPDEEI
GRGVQPQLER DLGADFAYTL DGGELGEVEY ESFSADRAVV KITGVSIHPG LAKEKMVNAI
HLASKIIQTL PQATMTPETT ADREGFIHAT DMFGGSSEME IRFILRDFEM ADLEAKGALL
RSVCEAVAAT EPRAEITCEI TPQYRNMRYW LEKDMTPVDL AHAACRDVGL EPVSVPIRGG
TDGSRLTEFG TPTPNIFTGM QCIHGPLEWI SVQDMSLATQ MCLSLAARAA TLDKT
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