| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0639 |
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| Symbol | |
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| ID | 4076126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 681912 |
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| End bp | 682865 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005936 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612634 |
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| Protein GI | 99080480 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.322343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.273997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGAA TTGACATCTC TCAAATCAGC GGACGCGTGC TGCGTGTTTT CCTGACTGTC
TATGACGAGA AATCAGTAAG CCGGGCCGCG GATGTGCTCG AAAGCAGCCA ATCCACCATC
AGCCACAATA TTGAAAAACT GCGCGGATTG CTGGGGGATG CGCTGTTTGT GCAATCCGGA
CGCGGCATCG TCCCAAGCGC ACGTGCGGAC GTCCTGGCAC CAAAGGTCCG CCGCATTCTG
ATCGAGATGG AAGGCCTGGC AGATCAGGGC ATCTATGACC CCATCACCGA CCCCGACCCA
TTTGTCATTG CGTTGAGTTC AAGCATCCTG GATGGCGAAC TTGAGACCAT ATATGACGCC
TTGCGCCTCA GCCTGCCGCA GAAGCACCTC ATGTTTCGGG ACCTTGGCAA GCTCTCGGAG
ATCGAGCCCC TTCTGGAGAC GCGCCAGGCG GATGTGGTTC TCACGCTGCG CCCACGGTCC
TATCCCAACA CGCTCCGCCA CATGGCTCTG ACGCAAGACA GTTTCCGCGT GTTCTACGAC
CCAAATGTCA GAGGGCCGGT CGATAGCGTC GAGGACTTTT GTGGGGCACC CCATGCCACC
GTATCCTTCG GCCAGGGCAG CAAGAGCCTG CTGCAGACCG AGCTCGAAGC ACTGGCGATC
CACCGACGGG TCACACTCGG GGTGCCCAAC CTTTGGACCC TCATCCGGCT GATGCAGGGC
ACCGACATGA TTGCAAGCTT GCCTTCCCGC TCGTCACGCC ACACCACAGG CACTCTGGCA
TCCTCGCCCT TTCCGGTCGA GTTGCCGCCT TTACAGTTCG ATCTGGTCTG GCACCGCCGC
TTTGCGGATT CTGCGCGGTT GCAGTGGTTG CTGATGACGA TTGAAACCGC ACTGGCCCAG
CAAGCTCAGG ACCACCCCAA TGACGTTGGG CTTCGCGCGC ACTCGTTCGA GTAG
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| Protein sequence | MPRIDISQIS GRVLRVFLTV YDEKSVSRAA DVLESSQSTI SHNIEKLRGL LGDALFVQSG
RGIVPSARAD VLAPKVRRIL IEMEGLADQG IYDPITDPDP FVIALSSSIL DGELETIYDA
LRLSLPQKHL MFRDLGKLSE IEPLLETRQA DVVLTLRPRS YPNTLRHMAL TQDSFRVFYD
PNVRGPVDSV EDFCGAPHAT VSFGQGSKSL LQTELEALAI HRRVTLGVPN LWTLIRLMQG
TDMIASLPSR SSRHTTGTLA SSPFPVELPP LQFDLVWHRR FADSARLQWL LMTIETALAQ
QAQDHPNDVG LRAHSFE
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