Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0588 |
Symbol | |
ID | 4078626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 628389 |
End bp | 628832 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638005885 |
Product | MaoC-like dehydratase |
Protein accession | YP_612583 |
Protein GI | 99080429 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00165454 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGACA ATTTCCCCCG CGGTACCATC TGCATCGAGG ACATCGAGAT GGGTATGACG CGCTATCTGC GCAAACAGGT GACCGACCGT GACATTGAAA TGTTTGCTGA GGTCTCCACC GATAGAAATC CCGTGCACCT GGACGAAGAC TACGCGCAAG ACACCATGTT TCACGGGCGT ATAGCGCATG GCATGCTGAC CGCCGGCCTG ATTTCTGCGG TGATCGGCGA GCAACTGCCG GGCCATGGCA CCATCTACAT GAGCCAGAAT CTCAAGTTTC TCGCCCCGGT ACGACCGGGT GATCTGGTGC ATGCGGAAGT CGAGGTCACC GACATCCAGA TCGACAAGCG CAGGGTAAAG CTGGATTGCC GCTGCATCGT CGATGGCAAG AAGGTGCTCG TCGGAGAAGC CATGGTGATG GCGCCCTCGC GCAAGTTCGA CTAA
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Protein sequence | MLDNFPRGTI CIEDIEMGMT RYLRKQVTDR DIEMFAEVST DRNPVHLDED YAQDTMFHGR IAHGMLTAGL ISAVIGEQLP GHGTIYMSQN LKFLAPVRPG DLVHAEVEVT DIQIDKRRVK LDCRCIVDGK KVLVGEAMVM APSRKFD
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