Gene TM1040_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0588 
Symbol 
ID4078626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp628389 
End bp628832 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content57% 
IMG OID638005885 
ProductMaoC-like dehydratase 
Protein accessionYP_612583 
Protein GI99080429 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00165454 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGACA ATTTCCCCCG CGGTACCATC TGCATCGAGG ACATCGAGAT GGGTATGACG 
CGCTATCTGC GCAAACAGGT GACCGACCGT GACATTGAAA TGTTTGCTGA GGTCTCCACC
GATAGAAATC CCGTGCACCT GGACGAAGAC TACGCGCAAG ACACCATGTT TCACGGGCGT
ATAGCGCATG GCATGCTGAC CGCCGGCCTG ATTTCTGCGG TGATCGGCGA GCAACTGCCG
GGCCATGGCA CCATCTACAT GAGCCAGAAT CTCAAGTTTC TCGCCCCGGT ACGACCGGGT
GATCTGGTGC ATGCGGAAGT CGAGGTCACC GACATCCAGA TCGACAAGCG CAGGGTAAAG
CTGGATTGCC GCTGCATCGT CGATGGCAAG AAGGTGCTCG TCGGAGAAGC CATGGTGATG
GCGCCCTCGC GCAAGTTCGA CTAA
 
Protein sequence
MLDNFPRGTI CIEDIEMGMT RYLRKQVTDR DIEMFAEVST DRNPVHLDED YAQDTMFHGR 
IAHGMLTAGL ISAVIGEQLP GHGTIYMSQN LKFLAPVRPG DLVHAEVEVT DIQIDKRRVK
LDCRCIVDGK KVLVGEAMVM APSRKFD