| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0559 |
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| Symbol | |
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| ID | 4077910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 595854 |
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| End bp | 596258 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005856 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_612554 |
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| Protein GI | 99080400 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0388292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.194184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATT GCCCTTCGAA TGACCGCTAC GGCGCCGGAA TGGCGGTCCG TCGCAAGATT
TTGGGCGACG CCCATGTGGA CCGTGCCGAA GCTGCCAAAA CCGCATTTGA TGAGCCATTT
CAAACACTGA TCACTGAAAC CGCCTGGGGC AACGTCTGGG CCAGCGATGG AGTCTCGGAC
CGCGAACGCT CCATGCTGAC ACTCGCACTG TTGGCAGCGC TTGGGAACTT TGACGAGATC
CCCATGCATA TCCGCGCCAC GGCCCGAACC GGCGCCAGCA AGACCGACGT GCTTGAGGCC
TTTCAGCATG TCGCGGTCTA TGCAGGGGTG CCACGCGCAA ATCATGCGCT GAAACTGGCC
AAGGAAACCT ATGCCGAAAT GGACCGGGAG GACCAACAGT CATGA
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| Protein sequence | MSDCPSNDRY GAGMAVRRKI LGDAHVDRAE AAKTAFDEPF QTLITETAWG NVWASDGVSD
RERSMLTLAL LAALGNFDEI PMHIRATART GASKTDVLEA FQHVAVYAGV PRANHALKLA
KETYAEMDRE DQQS
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