| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0541 |
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| Symbol | |
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| ID | 4077188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 573619 |
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| End bp | 574689 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005838 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_612536 |
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| Protein GI | 99080382 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.804556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TCACCGTTCT CTCCGGTATC GGCGATAAAG GCCCCGCCGC CATGCGCCTT
GATACCGGAC GCCACCGCTG GCTTCTGGAT TGCGGCTTTG GCCCGGAGGC CAACGCCACC
TTTGATCCCG ACTGGCTGAT CGGGGTCGAC GCGGTCTTTG TGACCCACGA CCATATCGAC
CACATCGGCG GCGCGGCCTA CGCCGTGGAG GCGGGCTTGC CGATCTATGC CACCCGTCGC
ACCGCGCAAG CACTGCCACC CTCGGCACAG GTGATCGCGC TCCCTGAACA GGGAGAGACG
CACCTTGACG GAATTTGCCT CACCACCGGT CGCAATGGCC ATGCTCTTGG TGGCGTGTGG
ATGCATTTTG ATCTCGGCGC GGGATTGTTC TACTCCGGCG ATTGGTCTGA AGAGAGCCAA
TGGTTTGCTT TTGACGAGCC ACCAGACGCG GCCACTGCGA TTATCGACTG CTCCTATCAC
CTGAGCAACG TCCCCCAAAG CCAGCGACTT CAGGACCTCG ACGCGCTGAT TGACGACCTT
GGTGGCCAGA TCCTCTTTCC GGTGCCGCCC TCTGGCCGCG CGGGCGAGCT GGCGTTGCAC
CTGATGCACC GCTTTGGCCC CGAAGCGGTT CTGCTCGACC CCGAATGCTG CGACAGCCTG
CGCGCCGCCC TCAGGTCTGG CGGTGTCGCG CCGCGCGCGC AAGAAATTGC GCCGCTGCTG
GAGCGTGGCC CGCTCGATGA GGCCCGGTTT CTGATCTGCG ACACCCCAAA CGCCGACGGC
GGCGCCGCCT GGGCCTATGT GCGCGCGTGG CGCGAAAGTG GCCGTTTGGG GCGGGATGCT
CATGTGATCT TCACAGGTCA TATGACCGCC CATGCCCGCG GCATCGAGGC TGTCGAGGGC
GGGTACTTTC GCCGCTGGAA CGTTCATCCC CCGCTTTCGG ACCAGATCGC CATGATCCGC
CGCCTCGGCA CCAAGCGCTA CGCCCCCGCC TTCTGCACCA TGCCCGAGGA CTATCTGGTC
GAAGAAGGTT TTGATGCGCA GGTCTTTTTA CACGAAACAG TGGAGCTCTA A
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| Protein sequence | MSTITVLSGI GDKGPAAMRL DTGRHRWLLD CGFGPEANAT FDPDWLIGVD AVFVTHDHID
HIGGAAYAVE AGLPIYATRR TAQALPPSAQ VIALPEQGET HLDGICLTTG RNGHALGGVW
MHFDLGAGLF YSGDWSEESQ WFAFDEPPDA ATAIIDCSYH LSNVPQSQRL QDLDALIDDL
GGQILFPVPP SGRAGELALH LMHRFGPEAV LLDPECCDSL RAALRSGGVA PRAQEIAPLL
ERGPLDEARF LICDTPNADG GAAWAYVRAW RESGRLGRDA HVIFTGHMTA HARGIEAVEG
GYFRRWNVHP PLSDQIAMIR RLGTKRYAPA FCTMPEDYLV EEGFDAQVFL HETVEL
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