Gene TM1040_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0521 
Symbol 
ID4077227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp547839 
End bp548060 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content58% 
IMG OID638005817 
Productribonucleoside-diphosphate reductase class Ib glutaredoxin subunit 
Protein accessionYP_612516 
Protein GI99080362 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02194] Glutaredoxin-like protein NrdH 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.317341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.144081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CTGTCTATTC AAAACCTGCC TGCGTGCAGT GCACCGCCAC CACCCGCGCT 
CTTGAGGCGA AAGGGATCTC TTTTGACCTC GTTGATCTGA CAGAAGATGC CGCTGCTCTG
GAAATGGTGC AGGGTCTGGG CTATCGTCAG GCACCCGTGG TGGTCGCTGG CGAAGAGCAC
TGGGCTGGTT TTCGCCCTGA CTTGATCGGC CAGTTGGCGT AA
 
Protein sequence
MSITVYSKPA CVQCTATTRA LEAKGISFDL VDLTEDAAAL EMVQGLGYRQ APVVVAGEEH 
WAGFRPDLIG QLA