| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0512 |
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| Symbol | |
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| ID | 4077218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 538014 |
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| End bp | 539153 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005808 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_612507 |
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| Protein GI | 99080353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.252109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACA CGACGCATAT CGAAGAGGCC ATCGCCCTGC GCCATGACCT TCATCGCCAC
CCAGAGTTGG GGTTCGAAGA GCATCGCACC TCCGAGATCA TCGCGGGCCT TTTGCACGGC
TGGGGCTGGC GTGTGCATCG TGGTCTCGCA GGGACAGGGG TTGTTGCGCA GATGGGGCAG
GGGGAACCGG TCATAGGTCT GCGCGCCGAT ATTGATGCAT TGCCGATGGA GGAGGCTACA
GGGCTGGCCT ATGCCTCGGG GACGCCCGGC AAGATGCATG CCTGCGGTCA TGATGGTCAC
ACCGCGATGT TGCTGCTGGC TGCGCGCAAG ATCGCCGAAG AGGGCGTGGC CACAGGCACG
GTAACGCTGA TCTTCCAACC CGCAGAGGAG AATGATGGCG GCGCACGGGT CATGATTGAA
CAGGGGCTGT TTCGCGAGTT TCCGGTCGAT CAGGTCTATG GCATTCACAA CTGGCCGGGG
CTCGCGCCAG GGCGCATGGT GGCGCGTGAC GACAAGATGA TGGCGGCCTT TGCCGTCTTT
GAGATCGAGG TTGCCGGGCA GGGTGGGCAT GGCGCAATGC CGGAGCAATC GGATGGGGTC
ATCGCGGCTG CAGCGGCGAT GGCGTCGACG TTGCAGGAAA TTCCTGCCCG CGCTTTGTCG
CCGCTGGAGC CGGGCGTGGT CTCGGTGACG CAGATCCATT CCGGATCGGC GTGGAATGTC
TGCCCTGACC GTGCGGTCTT GCGCGGGACC GCGCGCTGGT TCGATCCCGC TGCTGGCGAT
ACGATTGAGG CCCGTCTGAC ACAGGTGGCG AACGCCTGCG CCGCCGCACA GGGGTGCAGC
GCGCGTATTG ATTACCAGCG TCGCTATCCC GCGACGATCA ACTCTGCTGT CGAGGCCGCT
GCGGCGCGCG CGGTGGCCGC CGAGATGGGG CTTGAGACAG CCAATGTGGC ACCGAGCATG
GCATCAGAGG ATTTTGCCTT TATGCTCAAC GAGGTGTCCG GCGCCTATAT CTGGCTTGGA
GCGGCGCGCG ACGGAGAAAA TCCGGGTCTG CACTCAGCCA AATTTGATTT CAATGATGCC
GTGCTCCCAG TCGGGGCCGA GTTCTGGGTG CGGCTGGCCC GCCGCCAGCT GGCGACCTGA
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| Protein sequence | MFDTTHIEEA IALRHDLHRH PELGFEEHRT SEIIAGLLHG WGWRVHRGLA GTGVVAQMGQ
GEPVIGLRAD IDALPMEEAT GLAYASGTPG KMHACGHDGH TAMLLLAARK IAEEGVATGT
VTLIFQPAEE NDGGARVMIE QGLFREFPVD QVYGIHNWPG LAPGRMVARD DKMMAAFAVF
EIEVAGQGGH GAMPEQSDGV IAAAAAMAST LQEIPARALS PLEPGVVSVT QIHSGSAWNV
CPDRAVLRGT ARWFDPAAGD TIEARLTQVA NACAAAQGCS ARIDYQRRYP ATINSAVEAA
AARAVAAEMG LETANVAPSM ASEDFAFMLN EVSGAYIWLG AARDGENPGL HSAKFDFNDA
VLPVGAEFWV RLARRQLAT
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