| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0496 |
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| Symbol | |
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| ID | 4078242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 518906 |
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| End bp | 520426 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005792 |
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| Product | ABC transporter related |
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| Protein accession | YP_612491 |
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| Protein GI | 99080337 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0969653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGC CTCCCCTTCT GACCCTTGAC GGCCTCACCA AGGCCTATCC CGGCGTCGTC
GCCAATGACC AGGTCTCCTT CACCATCGGC ACAGGCGAGG TGCATGCGCT TCTGGGTGAA
AACGGTGCCG GAAAATCGAC ACTCGTGAAG ATGATCTATG GCCTCGTGAA ACCGGATTCC
GGTCGCATGA CCCTGCGCGG AGCGGCCTAT GAGCCCTCCG AGCCGCGTCA AGCGCGCGCA
GACGGCATTG CCATGGTATT TCAGCATTTT TCGCTATTTG ATGCGCTGAA TGTGGCAGAA
AACATTGCCC TTGGCATGGA GAGCCCACCG GCGCTGCGTG ATCTGGCGGC CCGGATCCGT
GAGGTGTCCG AAGCCTATGG GCTGCCGCTC GATCCTTACC GCACGGTCGG AGACCTTTCG
GCGGGCGAGC GTCAGCGGGT GGAGATCATT CGCTGCCTGC TGCAGGACCC AAAGCTTCTG
ATCATGGACG AGCCGACATC AGTTCTGACA CCGCAAGAGG TGGAGATCCT CTTTGAGACC
CTGCGCAAGC TGAAGTCCGA AGGGACCTCG ATCCTTTATA TCTCGCACAA GCTCGAAGAA
ATCCGCGCGC TCTGCGACCA CGCGACGATC CTGCGGCTCG GCAAGAATGT GGGCGAATGC
GTGCCGCGCG AGACCTCTGC CCGCGAGATG GCAGAACTGA TGGTGGGTAG CGCGCTCAAG
ACGCCGGAAC GCGGCGCGCG CAGATTTGGT GATGTGGCAC TGGATATTTC TGGCCTTTCG
GTGCCCGCGC CTTCGGCATT TGGCACCGCG TTGAAGAATG TGCACCTGAC CGTGCGTCGG
GGCGAGATCC TTGGCATTGG TGGTGTTGCA GGCAACGGGC AGGACGAGCT GCTATCAGTG
ATGTCGGGTG AGGTGACCAC AGCCCGCGAC GCGGTGAAAT TCGACGGCCA GCCCATCGGG
CGAATGGGCC CAACCGCGCG CCGCGCTCTT GGTGTCCTCA GTGCTCCAGA AGAGCGCCTG
GGCCATGCCG CCGCGCCGGA TATGAGCCTG ACCGAAAATG CGCTTTTGAC CGGGTCGGTG
CGCGAGGGGC TGGAGCAGAA CGGTTTTTTG AAATGGGGGG CGACCAAGTC CTTTGCAGAG
AAGATCATCA AGGCGTTTGA TGTGCGCACA CCGGGACCGG AGAACGCGGC GCGCTCGCTC
TCTGGTGGGA ATTTGCAGAA GTTCGTCATT GGCCGTGAGG TGCTGCAGCG CCCCGAGGTC
CTGATCGTGA ACCAGCCCAC ATGGGGCGTG GATGCGGCGG CGGCGGCGGC AATACGGCAG
TCGCTACTTG ATCTTGCCGC GCAGGGGACT GCGGTGATCT GCATCAGTCA GGATCTCGAT
GAGCTGATGG AAATCTCCGA CAATTTCGCC GCCCTCAATG AGGGTCGTCT GTCCGCCCCG
CGCCCCACGG GGGAGCTGAC GGTGGATGAG ATCGGCCTGA TGATGGGCGG TGCACATGGC
ATGGAAGTGG CGCATGTGTA G
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| Protein sequence | MSTPPLLTLD GLTKAYPGVV ANDQVSFTIG TGEVHALLGE NGAGKSTLVK MIYGLVKPDS
GRMTLRGAAY EPSEPRQARA DGIAMVFQHF SLFDALNVAE NIALGMESPP ALRDLAARIR
EVSEAYGLPL DPYRTVGDLS AGERQRVEII RCLLQDPKLL IMDEPTSVLT PQEVEILFET
LRKLKSEGTS ILYISHKLEE IRALCDHATI LRLGKNVGEC VPRETSAREM AELMVGSALK
TPERGARRFG DVALDISGLS VPAPSAFGTA LKNVHLTVRR GEILGIGGVA GNGQDELLSV
MSGEVTTARD AVKFDGQPIG RMGPTARRAL GVLSAPEERL GHAAAPDMSL TENALLTGSV
REGLEQNGFL KWGATKSFAE KIIKAFDVRT PGPENAARSL SGGNLQKFVI GREVLQRPEV
LIVNQPTWGV DAAAAAAIRQ SLLDLAAQGT AVICISQDLD ELMEISDNFA ALNEGRLSAP
RPTGELTVDE IGLMMGGAHG MEVAHV
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