| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0490 |
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| Symbol | |
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| ID | 4078528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 512568 |
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| End bp | 513653 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005786 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_612485 |
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| Protein GI | 99080331 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0127123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.162763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGACA CTCTGATCAT CGGCGGCGGA GTGGCCGGGC TTGGTGCAGC GGCACATTTG
TCGCCATCGC ATCAGGTGGT GGTGCTGGAA CGCGAGGAGG TGCTTGGCTA CCACGCCTCC
GGGCGCTCTG CCGCGATGTT TGAGCAGGAC TATGGCCCTC CTGCCATCAA GGCACTGTCG
CGGGCCAGCC GCACCTTTTT CGAGGCCCCC GGCGAGGGGC GCGAGACATA TCTCAGCCCG
CGCGGACTGA TGCTCGTTGG GCGCGCGGAT CAACGCGCAG CGTTTGATGC AGATCTTGCG
GAACTCGATC TTCAGGAGAT TCCCATCAAC GATGCGCTGG CACGGGTGCC GATCCTGAAC
CGGGAGGTCG TCGCCTTTGC TGCGCTTCAT GACACGGCAA CCGACATCGA CACCGACCGG
TTGATGGGAG ACTGGACCAA AGACCTGCGC CGGCAGGGTG GCCAAACGGT CTTGCGACAG
GAGGTGATGA CGATCTCGCG CACCGACAAG GGCTGGCGCG TTGAAACCCG CGACACCCAA
TATGAGGCCC GCCAGATCGT CAACGCTGCC GGGGCTTGGG CAGACATCAT CGCAGAAACC
GCCGGGGTCA CTCCGATCGG GCTCCAGCCC AAACGCCGCT CCATCGCGCA ACTGCCTGCC
CCAGAGGGTC GAGACGTCGC CAACTGGCCT ATGCTCATGG GCGTGGGAGA GGCCTGGTAC
GCCAAACCCC AAGCGGGCAA GCTTCTGGTT TCGCCTGCGG ATGCTGATCC CCTGCCTCCA
CAGGACGCCT GGGCGGATGA CATGGTACTG GCGGAGGGGC TTGCGCGCTA CGAGGAGATG
GTGACCACGC CCGTTACACG GCTCGAAACC AGCTGGGCCG GATTGCGCAG TTTCGCTCCC
GACGGTGTGC CGGTTATTGG CGAGGATCCG GATCATCCCG GATTCTGGTG GTACGCGGGC
CAAGGTGGCT ACGGGTTTCA AAGCGCCCCT GCCTCGGCCC GGCTACTGCG CGACCTGATG
ACAGGGCAGC GCCCAGAGAT CGCTCCTCAC ATCATTGACG CTCTTGATCC TGCGAGGTTG
CGCTGA
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| Protein sequence | MIDTLIIGGG VAGLGAAAHL SPSHQVVVLE REEVLGYHAS GRSAAMFEQD YGPPAIKALS
RASRTFFEAP GEGRETYLSP RGLMLVGRAD QRAAFDADLA ELDLQEIPIN DALARVPILN
REVVAFAALH DTATDIDTDR LMGDWTKDLR RQGGQTVLRQ EVMTISRTDK GWRVETRDTQ
YEARQIVNAA GAWADIIAET AGVTPIGLQP KRRSIAQLPA PEGRDVANWP MLMGVGEAWY
AKPQAGKLLV SPADADPLPP QDAWADDMVL AEGLARYEEM VTTPVTRLET SWAGLRSFAP
DGVPVIGEDP DHPGFWWYAG QGGYGFQSAP ASARLLRDLM TGQRPEIAPH IIDALDPARL
R
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