| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0465 |
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| Symbol | |
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| ID | 4078347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 483198 |
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| End bp | 485213 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005761 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_612460 |
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| Protein GI | 99080306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATC CGCTGCTTCG CGACTGGCAA ACGCCCTTTG GGATTGCCCC GTTCGATCAG
ATTTCCGACG AAGACTTTGC GCCTGCGCTT GATGAGGCGC TAAAGGCGCA TACTGCGCAG
ATCGATGCGA TTGCCACCAA CCCCGCGCCG CCCACATTCG CCAATGTGAT CGAGGCTCTC
GAGACGCCAT GCCAGCCACT TGAACAGGTG CTGTCGGTGT TTTTCTCGGT GGCCGGGGCG
GACAGCAACC CGGCGCGCGA GGCGCTCCAG CGCGCGTTCT CTCCGAATCT TGCGGCGCAT
TTCTCGGCCA TTACTGCCAA TAAGGCACTT TATGCACGGG TGCAGGCGGT GTGGGACCAA
CGCGACACTC TGGACCTGAC CGACGAACAG GCCCGTGTCC TGATGCTCAC CCATCGTGGG
TTTGTGCGCG GCGGCGCGGC GCTCAATGGC GCGGAAGATA CCCGCATGCA GGAGATCAAA
TCCCGCCTTG CGACGCTTGG CACCAATTTC ACCCAGAACC TGCTTGCGGA TGAGCGGGAC
TGGTTCATGG AGCTCTCCGA GGACGATCTT GAGGGGCTTC CTGATTTTGT TGTGAAGGCC
GCACGGACCG CGGGGGCCGA AAAAGGCGTT TCCGGGCCGG TCATTACGCT TGCGCGCTCT
ATCGTGACGC CTTTCCTGCA GTTCTCGCCG CGCAGGGACC TGCGTGAAAA GGCCTTTCGG
GCCTGGGCTG CACGAGGGGC AAATGGCGGC GCACATGACA ACCGGGCGAT TGCGGCAGAG
ATCCTGTCGC TGCGTGAAGA ACGGGCCAAG CTCTTGGGCT ATAGGAATTT TGCGGCCTAC
AAGCTGGAAA CCGAGATGGC CAAAACGCCG GAGGCGGTGC GTGAGCTGTT GATGGATGTC
TGGGGGCCAG CCAAGGCGCA GGCGGACAAG GACGCCGAGG TGTTGACGCG GATGATGCAT
GAGGACGGCA TCAATGGCGA TCTGGCGCCT TGGGATTGGC ATTACTACGC AGAAAAACGT
CGCAAGATAG AACATGATCT CGACGAAGCC GAACTCAAAC CATACCTGCA GCTCGACCGG
ATGATTGAGG CGGCTTTTGC CTGCGCAAAT CGTCTGTTTG GCCTGGAATT CGCACCTCTT
GATGTGCCGC TTTATCACAA GGACTGCCGC GCCTGGGAGG TTACGCGGGA AGGCAAGCAT
CTGGCGGTGT TTATTGGGGA CTATTTCGCG CGGGGATCAA AGCGGTCCGG CGCGTGGTGT
TCGGCTATGC GTGCGCAGGC GAAATTCCCC GAGGAACAGA CGCCAATCGT GGTCAATGTC
TGCAACTTTG CCAAAGGCGA CCCGGCGTTG TTGTCCTATG ACGATGCGCG CACGCTGTTC
CACGAGTTTG GCCATGCGCT GCACCAGATG CTGTCGAATG TAACCTATGA GAGTGTCTCC
GGGACCTCCG TGGCGCGCGA TTTTGTGGAA CTCCCGAGCC AGCTCTATGA GCATTGGCTG
GAGGTGCCCG AGGTACTGCA GGAGTTTGCC ACCCATGCAG AGACCGGCGC GCCGATGCCG
AAGGAGATGC TCGACAAGGT GCTTGGGGCT GCGACCTTCA ACATGGGGTT CCAGACCGTC
GAATATGTGG CGTCCGCATT GGTGGATCTG GAATTTCATG ATGGCAGCGC ACCCGAGGAT
CCGATGGTCA AACAGGCCGA GGTTCTCGCA CAGATCGGCA TGCCGGCAGC GATTGTCATG
CGCCATGCTA CGCCGCAGTT TGCGCATGTT TTCTCAGGCG ACGGGTACTC CTCGGGCTAC
TACAGCTATA TGTGGTCAGA GGTAATGGAC GCCGATGCTT TTGAATCCTT TGAGGAAGCC
GGCGGCGCCT TTGATCCTGC ACGCGCTGCG GCGCTTGAGG CACACATTCT GTCCAAAGGG
GGCTCTGAGG ATGCCGCTGA GCTGTATACG GCGTTCCGGG GGCGACTTCC GGGGGTGGAC
GCGCTTTTGA AAGGGCGTGG GCTGGCCGCC AAGTGA
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| Protein sequence | MTNPLLRDWQ TPFGIAPFDQ ISDEDFAPAL DEALKAHTAQ IDAIATNPAP PTFANVIEAL
ETPCQPLEQV LSVFFSVAGA DSNPAREALQ RAFSPNLAAH FSAITANKAL YARVQAVWDQ
RDTLDLTDEQ ARVLMLTHRG FVRGGAALNG AEDTRMQEIK SRLATLGTNF TQNLLADERD
WFMELSEDDL EGLPDFVVKA ARTAGAEKGV SGPVITLARS IVTPFLQFSP RRDLREKAFR
AWAARGANGG AHDNRAIAAE ILSLREERAK LLGYRNFAAY KLETEMAKTP EAVRELLMDV
WGPAKAQADK DAEVLTRMMH EDGINGDLAP WDWHYYAEKR RKIEHDLDEA ELKPYLQLDR
MIEAAFACAN RLFGLEFAPL DVPLYHKDCR AWEVTREGKH LAVFIGDYFA RGSKRSGAWC
SAMRAQAKFP EEQTPIVVNV CNFAKGDPAL LSYDDARTLF HEFGHALHQM LSNVTYESVS
GTSVARDFVE LPSQLYEHWL EVPEVLQEFA THAETGAPMP KEMLDKVLGA ATFNMGFQTV
EYVASALVDL EFHDGSAPED PMVKQAEVLA QIGMPAAIVM RHATPQFAHV FSGDGYSSGY
YSYMWSEVMD ADAFESFEEA GGAFDPARAA ALEAHILSKG GSEDAAELYT AFRGRLPGVD
ALLKGRGLAA K
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