| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0441 |
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| Symbol | |
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| ID | 4076084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 457910 |
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| End bp | 458506 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005737 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_612436 |
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| Protein GI | 99080282 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.805705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCCGGA CGATTGCCAA AGACCACGAT CAAAAGCGCG CGCAGATCCT CGCGGCATCG
GCGCGCCTTT TTGCCGAGGA AGGCTATGAC CGGGCCTCGA TGACGCAGAT CGCGCGGGCC
TGCGGGATCT CCAAGGCCAA TATCTATCAC TACTACGAGG GCAAGGACGC GCTGCTCTTT
GACCTTCTCG ACAGCTATTT GCGCGGGCTC AGGGACCGGG TCTGCGGTCT TGAGCTGAGC
GATCCGGACC CGGTTGTGCG CCTGCGCCTT ATCCTGACCG AGGTACTTTT GGCCTATGAG
GGCGCCGATC ACGAACACAA GGTGCAGCTC AATGCGATGT CAGCGCTGCC GGAGCCACAA
CAGGAGCATC TGCGCGCGTA TCAGCGTGAA ATGGTAAAAT TCATGAGCGC TGCGATCCGC
GATGCGGCGC CTGATACTTT GGCTGCGGAC AAGGACAAGC TGCGCGCGGT GACGATGTCT
GTGTTTGGGA TGCTGAACTG GCACTACATG TGGAATGCGG GCGCAGATAC CGAGGACCGC
AAAGGCTATG CCGATGTGGT TGCGCGCCTC ACGCTTCACG GCGTCTCCGG GCTTTAG
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| Protein sequence | MARTIAKDHD QKRAQILAAS ARLFAEEGYD RASMTQIARA CGISKANIYH YYEGKDALLF
DLLDSYLRGL RDRVCGLELS DPDPVVRLRL ILTEVLLAYE GADHEHKVQL NAMSALPEPQ
QEHLRAYQRE MVKFMSAAIR DAAPDTLAAD KDKLRAVTMS VFGMLNWHYM WNAGADTEDR
KGYADVVARL TLHGVSGL
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