| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0434 |
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| Symbol | |
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| ID | 4076077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 448712 |
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| End bp | 451171 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005729 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_612429 |
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| Protein GI | 99080275 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCTT CCCTTCCGAC CCAAGCGCAA GTCGTGATCA TCGGCGGGGG GTCGATCGGC
TGCAATATCG CCTATCACCT CACGCAACTT GGCATGACAG ACGTTGTGAT TCTGGAGCGC
GACAAACTGA CAGCTGGCAC AACGTGGCAC GCCGCAGGCG AAATCGTCCC GGCCGTTCTC
GGTGCGGAGT GGGAATGCGA ACTCTATCTA CACGGCCGCG AACTGATTGC TGGCCTTGAG
GCAGAAACAG GACTGGCGAC CGGCTGGCGC GAAGTCGGCT ACATTCAACC GGCAGACACC
GCGGAACGCC TTGAGGAAAT GCGCCGTGGC GCGGCCTTCA TGAACCTTCA CGGTTTCGAA
ATCCACGAGA TCTCACCGCG CGAGGCGCAG GAACGCTTTC CGATTGGCGA CTTCAGCAAC
ACGCTTGCCG CCTTCTGGTA TCCCAAGGAA GGCCGCACCA ACCCGGTGGA CACAACGATG
GCGCTGGCGC GCGGCGCGCG CACTCGCGGC GCGCAGATCC TTGAAGATGT CGCTGTGACA
GATATCCTCA CGCGGCAAGG ACGCGCTGTT GGTGTACGTA CCGATCATGG CGACATCGCT
GCCGAGCATG TGGTTATTGC TGCGGGCATG TGGTCGCGTC AGATCGGCGC AAAGGCTGGC
CTTAATCTGC CGCTGCAGGC CGCAGAACAC TATTATCTGA TCACAGAAGA GATCGAGGGT
ATCCACCGCG ATCTGCCACT GCTCGAGGAT CCGCACAATT GGTCCTACTA CCGAGAAGAA
GTTGGCGGCT TGCTGGTCGG CATGTTCGAA CCCGACGCCG CCCCGTGGAT GATCGACGCC
ATCCCGGACA ACTTTGCCTT TGGCGAGATT GAACCGGACT GGGATCGCAT GGCCCCTCAC
CTCGAAGCCG CTTTCAGCCG TGTGCCACTG GTCGCCGAAG CGGGTGTGCG CAAGCTCTTT
TGCGGACCCG AGAGTTTTAC CCCAGATCTT GCCCCCCTGA TCGGCGAGGC CCCCAGCCTG
CGTAATTGCT GGGTTGCCGC GGGGATGAAC TCGCTCGGGA TCCTCTATGG ACCGGGGGTC
GGCAAGACAC TGGCGCACTG GATTGTGGAA GGACGCTGCC CGGTAGATCA CACTGCGTTC
AACGTTAGCC GGTTTGCCGA CGGCACGCAT AACACACCCG CCTACCGACG CGCCCGCACC
CCCGAACTCC TCGCCAAGAG CTTCGGCGCG CATTTTCCAA ACGACAGCTT CAAAACGGCC
CGCGGCCTCA AGCGCTCGCC ACTCTACGAC CGGCTCAGGG CCGCCGGGGC CTATTTCACG
GAGAGCCACG GCTGGGAACT GCCTGACTGG TTTGCCCCGA CCCCAGAGGC GGCGAAGATC
GACCGCTATA GCTGGGGCCG GCAGAACTGG TTTGACTGGC ACGCCGAAGA ACACCGTGCC
GCCCGCGAGG ATGCAATCGT GATGGACATG TCCTCGATGG CAAAATTCCT TGTCCAGGGA
CGTGACGCCT GTACATTGCT AAATCGCATC AGCTGCAATG ACATCGACGT CCCCATCGGC
AAGGTGGTCT ATACCGCCTG GACCAACCAA GCGGGCGGCT TTGAAGCTGA CCTTACGGTA
ACCCGCATGG ACGTCGACCG CTTCATGGTT GTGGTCGGGG AGAACAGCCA CGGCCATACG
GAGACCTGGA TGCGGCGCCA CATCGGCGCC GATGAATTTG TAACAATCAC GGATATGACC
GACGGGATCA CGCAGATCAA CCTGCATGGA CCCAAGGCCC GGGACATCCT CGCAAAAGTG
AGCGCCGCAG ACCTCTCGCA AGAGGCCTTT CCCTTCATGA CTGCGCAACA TATTGATGTC
GGGCTCTTTC GCATTCACGC GCTCCGTGTC ACATATGTCG GCGAGCTGGG CTGGGAACTG
CACGTCCCGA GCCTGCACGC CGTGCAAGTC TATGACCTGC TGATGCAGGC TGGCGCAGAC
CACGGGCTGC GCAATGCCGG GATGCAAACA CTGTCTTCGC TGCGACTGGA AAAGGCTTAT
CGCGACTTTG GCGTGGATCT CGACAATACC GACACACCAA TTGAGGCAGG CCTGGGCTTT
GCCGTGAAGC TCGACAAACC CGGCGGCTTC ATTGGGCGCG ACGCCCTCGC CAAAATAAAG
GCCGCAGGCG CGCCCAAGCG GCGCATGCTG CAATTCCTGC TGAGAGACCC CGAGCCGCTG
CTGCATGGTA ATGAAATCAT CTATCTCGAC GATAAACCCG TCGGCTACAT CCAGGTCGGC
GCCTATGGGC ATACCCTTCA AGGCGCGGTC GGCATTGGAT TTGCGGAGAT CGAAACGCCA
CTGACCTCAG AGATCGCCAC GTCAGGCGCT TGGTCAATCG ACATCGCAGG GACCAAGATC
GCTGCAACCG CTTCGCTCAA ACCGCTCTTC GACCCCGCGA TGGAGAGAGT GAGAAAGTGA
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| Protein sequence | MPSSLPTQAQ VVIIGGGSIG CNIAYHLTQL GMTDVVILER DKLTAGTTWH AAGEIVPAVL
GAEWECELYL HGRELIAGLE AETGLATGWR EVGYIQPADT AERLEEMRRG AAFMNLHGFE
IHEISPREAQ ERFPIGDFSN TLAAFWYPKE GRTNPVDTTM ALARGARTRG AQILEDVAVT
DILTRQGRAV GVRTDHGDIA AEHVVIAAGM WSRQIGAKAG LNLPLQAAEH YYLITEEIEG
IHRDLPLLED PHNWSYYREE VGGLLVGMFE PDAAPWMIDA IPDNFAFGEI EPDWDRMAPH
LEAAFSRVPL VAEAGVRKLF CGPESFTPDL APLIGEAPSL RNCWVAAGMN SLGILYGPGV
GKTLAHWIVE GRCPVDHTAF NVSRFADGTH NTPAYRRART PELLAKSFGA HFPNDSFKTA
RGLKRSPLYD RLRAAGAYFT ESHGWELPDW FAPTPEAAKI DRYSWGRQNW FDWHAEEHRA
AREDAIVMDM SSMAKFLVQG RDACTLLNRI SCNDIDVPIG KVVYTAWTNQ AGGFEADLTV
TRMDVDRFMV VVGENSHGHT ETWMRRHIGA DEFVTITDMT DGITQINLHG PKARDILAKV
SAADLSQEAF PFMTAQHIDV GLFRIHALRV TYVGELGWEL HVPSLHAVQV YDLLMQAGAD
HGLRNAGMQT LSSLRLEKAY RDFGVDLDNT DTPIEAGLGF AVKLDKPGGF IGRDALAKIK
AAGAPKRRML QFLLRDPEPL LHGNEIIYLD DKPVGYIQVG AYGHTLQGAV GIGFAEIETP
LTSEIATSGA WSIDIAGTKI AATASLKPLF DPAMERVRK
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