| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0432 |
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| Symbol | |
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| ID | 4076075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 444427 |
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| End bp | 445458 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005727 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_612427 |
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| Protein GI | 99080273 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAGT CGAAAATCCG CAACATGGAA GAGCTGGCCA GCGTCAGCGG CATCTCCCGA
CCAACACTCT CCAAGTATTT CAACAACCCC GACAGCGTCC GCGCCTCAAC CCGCAAGAAG
GTCGAGGCCG CACTGCAAGA GCACCACTAT CAGCCCAACA TCTACGCAAT GAATCAGAAC
AGGAGGCTGA CCAAGAACAT TGGCATCGTG GTGCCGTATC TTGCGGATCC TTTCTTTGCT
GAGATTGCGC GTGTGATCGA GAATCTCGTC ATTCAGGGTG GCTTTCGACC GATCCTGCTC
AGCTCTCATG GCGAGACGAG GCAGGAGGTC GAAAACCTCG ACTCGCTGCG CTCGATCCGT
CCGGCTGGCG TTCTGCTGGC CCCCCTTGGC CGCCGCTCTG ACACGGCCGC GGTCGATCGG
TTTTGCACCG ATGTCCCGAC CGTTCTCTTT GACAACAACC TTGATGACCT CGGACAGGCC
TTCTTTGGGC TCGACAACCC GCAAAGCGTT GGTTTAATGG TGAAACATCT CTGCAAAACT
GGGGAGCCGC CCGTTTTCTT TGAGATGAAA ACCCCCACCA ACCCCAATGC TTACAAACGC
CGTCGCGCAT ATATCGATAC CATGGAAGCC TTGGGACTGG ACCCCAAACT GGTTCAGGTT
GAAGGCGAAA CCTGGGACTT TGAAGAGATC GGCTACAAAG GCGGCCTTGC GGCCATCCGA
AACCGCGAAC TCTGCACAAA CACGGTTCTA TGCTCCAATG ATCGCCTCGC GATCGGCTTT
CTGGCTGCCG CCTATGAATG CGGACTTCGG GTTGGCTGCG GGACCGGCTG CGCGCTGCGC
GTTGCCGGCC ACGACGACCA CCCCTATGCG CGCTTTACAT GCCCGCCACT CACCACCATC
GCGCAGGATT ATTCCGCCAT CGCAACGCGC AGCGTTGAGG CGATTCTCAA CCTCATCGAA
TCGGGAGAGC ACCCGGACCT GCGCAACAGC ACCCTGTTCG AGGGCACCTT GATCAAACGC
GCCTCCGCCT AA
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| Protein sequence | MSESKIRNME ELASVSGISR PTLSKYFNNP DSVRASTRKK VEAALQEHHY QPNIYAMNQN
RRLTKNIGIV VPYLADPFFA EIARVIENLV IQGGFRPILL SSHGETRQEV ENLDSLRSIR
PAGVLLAPLG RRSDTAAVDR FCTDVPTVLF DNNLDDLGQA FFGLDNPQSV GLMVKHLCKT
GEPPVFFEMK TPTNPNAYKR RRAYIDTMEA LGLDPKLVQV EGETWDFEEI GYKGGLAAIR
NRELCTNTVL CSNDRLAIGF LAAAYECGLR VGCGTGCALR VAGHDDHPYA RFTCPPLTTI
AQDYSAIATR SVEAILNLIE SGEHPDLRNS TLFEGTLIKR ASA
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