| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0410 |
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| Symbol | |
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| ID | 4078804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 420423 |
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| End bp | 421640 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005705 |
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| Product | sodium:galactoside symporter family protein |
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| Protein accession | YP_612405 |
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| Protein GI | 99080251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0469682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTGGC GGGTCAGCAC ATATGCACTG ATGCTGGCTG CGGCTGGCTT GCCGCTCTAT
ATCCACCTAC CGCGATACGC GACGGGGGAG CTTGGCATGA GTCTTGCCAC CCTCGGCGTG
ATCCTGGCCG GCATCCGGGT GATGGATTTT GCACAGGACC CCGCGATTGG CTGGCTGGTG
GACCGCTACC CGCGTCAAAA GCCTGCCTTT GCCACCCTTG CCGCTCTGGG CATGGCACTG
GGGTTTGTGA TGCTCTACAC GCTGCGGCCC GAGACGGGCA GCACGGTGTG GTTTACCGCA
GCCCTTGCGG TGGTATTCAC CGCCTACAGC CTTGGGACGA TCTTGTTTTA CGGGCAAAGC
GCCGCACTGG CGGCGCAGGG AAACGGGCTG ATTTCACTGG CCGGCTACCG TGAGGCAGGC
ACGCTGGCGG GCATTATCAT TGCCGCGAGT GCCCCGGCGG CACTGGTGGC ACTTGGGGCA
TCGGGCAGTG GATACGGCGC ATTTGGTATC CTGTTGGCCG CTATCTGCCT CGTCGCGCTC
TGGTCAAGCC GCCCGCTCTG GCGCGTCCCA AGTGCGTCTG ACGCCCCTTT GACCCTGTCC
GACTTGCGCA GCTCGGGGGC CCTCGGCCTT CTGGCGCTGG CGTTTGTGAA TGCGCTGCCG
GTGGCAATCA CCTCGACGCT GTTCTTGTTC TTTGTCGAAG ACAGGCTTCT GCTGCCGGAG
TTTGCCGGCC CCTTCCTGAT CCTGTTCTTT CTCGCAGCCG GGCTCTCGGT GCCGGTCTGG
ACCCGCACCG CAGCGCGATA TGGGGCGACT CGCAGCCTGA TCTTTGCGAT GTGCCTCGCC
ATTCTGGCCT TTGTCGGCGC CGCTCTCCTG CCTGCGGGTG CAGCCTTTGG ATTTGCGCTG
ATCTGCATTG GGTCCGGCGC TGCGCTTGGC GCAGATATGG TCATCCTGCC CGCCCTTTTT
GCAGGCGCGC TCGATCGTGC AGGGCTGCAA GCTGGTCGCG CCTTCGGGCT TTGGTCCTTT
GCCGCAAAGC TTGCACTCGC AAGCGCGGCG GCACTGCTGC TGCCGCTGCT CGAAGTGAGC
GGTTATCGGC CCGGCGAAAC AAATTCCGCA GCGGCGCTGA CCGCGCTGAC CCTCGCCTAC
GCGGTTCTGC CCTGTGTCAT CAAATGCGCC GCAATCGTGC TGGCGCTGCA ACTTCCCCGT
GAAGAGGTCC ATGCATGA
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| Protein sequence | MNWRVSTYAL MLAAAGLPLY IHLPRYATGE LGMSLATLGV ILAGIRVMDF AQDPAIGWLV
DRYPRQKPAF ATLAALGMAL GFVMLYTLRP ETGSTVWFTA ALAVVFTAYS LGTILFYGQS
AALAAQGNGL ISLAGYREAG TLAGIIIAAS APAALVALGA SGSGYGAFGI LLAAICLVAL
WSSRPLWRVP SASDAPLTLS DLRSSGALGL LALAFVNALP VAITSTLFLF FVEDRLLLPE
FAGPFLILFF LAAGLSVPVW TRTAARYGAT RSLIFAMCLA ILAFVGAALL PAGAAFGFAL
ICIGSGAALG ADMVILPALF AGALDRAGLQ AGRAFGLWSF AAKLALASAA ALLLPLLEVS
GYRPGETNSA AALTALTLAY AVLPCVIKCA AIVLALQLPR EEVHA
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