| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0403 |
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| Symbol | |
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| ID | 4078797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 412303 |
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| End bp | 413517 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005698 |
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| Product | formate dehydrogenase gamma subunit |
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| Protein accession | YP_612398 |
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| Protein GI | 99080244 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0151738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC TGATTTTCGT ATTCGTCCTC AAATTGGCCT TGCTTTGCGG CCTTTCTGTC
AACGCGCAGG AGGCGAGCCC AGCTGCGCCA GACCGCTCCG CCACCGGCGG CGCGCAGACG
CTCGAGGATA TTCTCGCGCG GCAACGTGGC GAGGATCTGG ACGACAGCTT CCGCAGCGAG
GCCACGGGCA ACCCCGAGCT TGCCGCCGGG ATTGAACAGC AGCTTGGCAC CCTTGGAGGC
CAGTCCGACC CCGAACTCTG GCGCGCATTG CGCTATAATT CTGCCGACAT CAGTGTTTCG
GCCGGCGGCG ATGTTGCGAC GGTTCTGGTG CAGGATGGCG GCATGAGCTG GCTGAGCTTC
CGCGAAGGAC CGCTGCGCCA ATATGGCGGG TGGCTCCTTT TAGGCACGAT TGCCGCGCTC
GCCGTCTTCT TTGTGCTGCG GGGCCGGATC GGTATCGATG CAGACAAGAC CGGACGCACC
GTGACCCGCT TTGCCTTTGT TGAGCGCATG GCCCATTGGA CGCTTGCGGG ATCGTTCATC
CTGCTGGGTA TCACCGGGCT TTTGACGCTC TTTGGGCGCG TCGCAATCCT GCCCTACCTG
GGCAAGGATG TGAATTCGGT GCTGCTCATC GGCTCCAAGT GGATCCACAA CTCCGTATCG
TGGGCCTTCA TGCTGGCGCT GATCGTGGTC TTTTTCATGT GGGTGGCGCA TAACATCCCA
AACAAGCTCG ATCTTGTCTG GCTCAAGCAG TTCGGTGGTA TCATCGGCAG CAAGCACCCG
CCCGCAAAGA AATTCAACGC AGGGCAGAAG GTGATCTTCT GGTCGGTGAT CTTGCTCGGG
GCCTCGATTT CCGTCTCTGG TCTGTCGCTG CTGTTTCCCT TCGAGATGCC GCTCTTTGCC
AAGACCTTTG CCGCTCTGAA CAGCACGGGA ATCCCGGAAT TGCTGGGCTT TGGGGTTCTT
CCCACCGAGC TTACGCCACA TGGCGAAATG CAGCTTGCAC AGCTCTGGCA CGCCATTGTC
GGCTTTGTCC TTATGGCGAT CATCATCGCG CATATTTATA TCGGCTCTGT CGGCATGGAA
GGCGCCTATG ATGCCATGGG GTCGGGCGAA GTGGATGAGG CCTGGGCCCA TCAGCACCAT
TCGATCTGGC TCGAAGAAGT GAAGGAAAAA GAGCGCGCAA AAGGCAGCGA CGCGAGCGCC
ACTCCGGCGG AGTGA
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| Protein sequence | MPRLIFVFVL KLALLCGLSV NAQEASPAAP DRSATGGAQT LEDILARQRG EDLDDSFRSE
ATGNPELAAG IEQQLGTLGG QSDPELWRAL RYNSADISVS AGGDVATVLV QDGGMSWLSF
REGPLRQYGG WLLLGTIAAL AVFFVLRGRI GIDADKTGRT VTRFAFVERM AHWTLAGSFI
LLGITGLLTL FGRVAILPYL GKDVNSVLLI GSKWIHNSVS WAFMLALIVV FFMWVAHNIP
NKLDLVWLKQ FGGIIGSKHP PAKKFNAGQK VIFWSVILLG ASISVSGLSL LFPFEMPLFA
KTFAALNSTG IPELLGFGVL PTELTPHGEM QLAQLWHAIV GFVLMAIIIA HIYIGSVGME
GAYDAMGSGE VDEAWAHQHH SIWLEEVKEK ERAKGSDASA TPAE
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