| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0373 |
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| Symbol | |
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| ID | 4077703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 382535 |
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| End bp | 383410 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005668 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_612368 |
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| Protein GI | 99080214 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTT TCCTCTTGGG GGCCACGGGC TCTATCGGCA CTGCCCTCCT GCCCGAACTC
TTGGCCGCGG GGCATCATGT CACCGCACTT TGCCGTTCTG ACATAGCGGC CAGGACCGTA
GATGCGCAGG GTGCCAAAGT GTGTCGCGGC GACATGCGCG CGCCTCAGGA TTGGGCCCCT
GCGCTTGAGG GCCAGGATGT GGTGATCCAT GCCGCCATCA CCTTCGATGA AGAGATGGCC
GCCGCCGACC GTCAGGTTGT CGACACGCTG ATCAACGCGG CCCAGACGCG CGCTGCTGCC
CTGCGCGTGA TCTATACCGG GGGATGCTGG CTCTACGGTG ACACCCGAGG TCGAATTCTA
CACGAGGCAG ACGGGTTTAA CCCAATTCCT GCATTTCGCC CCTTTCTGAA TCAGGCCGAA
CGTCTGATGA GGGAGCCCAC TCTCTCCACA GCCACACTGC ATCCAGCAAT GGTGTACCAT
CAAGAAGGCG GCGTCTTTGA TCGCATGCTT GCAGACATCG CGGCAGAGCG CCCGATTGAA
CTGTGGGGGA ACGCCAGCAT CCGCTGGCCA CTGATCCACC GCAAAGATCT CGCGGTTGCC
TATCGGTTGC TCGCAGAGGA CCCAGACCTC ACCGGGCATT TCAACGCGGT TGCCCAATGC
GGGGTCGAGA TCGGCGCAAT CGCCGCAACG CTCGCCCGTG CCCACGGCCA TGATGAAACC
TTGAATTGCC TCTCTCGCGC CAAGGCTCAG GCACTTGCAG GGCACTGGGC GGAGGGGCCA
ATGCTCGACC AGAGGCTCAG TGGAGCGCGC CTTCGAGCAG CGACGGGTTG GGTCCCGCAG
TATCAAGATC TGGAACAGTG CTTCCCGCCC CTCTGA
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| Protein sequence | MRIFLLGATG SIGTALLPEL LAAGHHVTAL CRSDIAARTV DAQGAKVCRG DMRAPQDWAP
ALEGQDVVIH AAITFDEEMA AADRQVVDTL INAAQTRAAA LRVIYTGGCW LYGDTRGRIL
HEADGFNPIP AFRPFLNQAE RLMREPTLST ATLHPAMVYH QEGGVFDRML ADIAAERPIE
LWGNASIRWP LIHRKDLAVA YRLLAEDPDL TGHFNAVAQC GVEIGAIAAT LARAHGHDET
LNCLSRAKAQ ALAGHWAEGP MLDQRLSGAR LRAATGWVPQ YQDLEQCFPP L
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