| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0347 |
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| Symbol | |
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| ID | 4076048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 353932 |
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| End bp | 355944 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005642 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_612342 |
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| Protein GI | 99080188 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA AAGACATGCG CGGGGTGCTT TTGTGCTCCG CTTCGGCAAT GGCATTGGCG
CTGAGCGCAC CGGTGGCGAA GGCTCAGGAC GTAAGCGAAG AGGACGGCTT CCTCGGGCTC
TTGGTGCTTG GCAACAACAA ACGCGAGGTG CAGACCGACA CCGCAGCGCC TGAAACGGTC
ATCAACGCCG AAGAAATTCA GGACCGTCAG GCCAGCAGCA TTGCCGAGCT CATCGACTCT
GTGCCCGGTG TGGCGCTGGT GAATTCCGGC ACCCCGACGG GGGCGGGGAT CAACATTCGC
GGACATGGTG CGGATGGCAC CTATGGCGCC AACCAAAAGG TCCAGATCCA GATCGACGGG
GCCTCGGTCG GCTCCGAGGA GCTCTATCGC ATCGGCACCC AATTGACGAC CGATCCTGAG
CTCTATCGCG AGGTTTCCGT CATTCGCGGC ACTGTGGGGT CGTTTGAATA TGGCTCCGGG
GTGATTGGCG GCGTGGTGCG GCTTGATACG ATCAATGCCT CGGATCTCAC CGATGGTCAG
GTCGGTCTCT CGGGACGGCA GACGCTGGGC TATCACGGCA ATTCGAACGC GCGGATCTCA
TCGACGATCC TGGGCTGGCA ACCCACTGAG AACCTTGAAT TCTTGTTCAA CTACACGCGG
CGCGAGCAAG ATGATTACAC CGATGGCAAC GGGGATGTCG TCAGCGATAC CGCCTCTGAG
GTTTCATCGC TGCTCTTGAA AGGCAAATAC AGCTTTGGCG ACAATGCGGC GCAATCCCTG
ACCCTGTCGT TCAATGAGAG CACATCGGAC GAAAAAGACG TCCCCTATGA TGCATTTGCG
GGCAATGCGG CCTTTGGCAA TGTGGACCGC CTGACCGAGA CCAAATCGGC CGTGCTGGAA
TATGCTTACA ACCCGCTGGG CAATGATCTG GTCGATCTCA CGGCGACGCT GTCCTATGCG
GATCAATACA TCGAGCAAGA GCAGGTGAGT GGGACGCCCT TTGGTATTCA GGACGCCGAT
CACCGCTATG AGACAACCAA GCTCACTGTG AAAAACAGCG CGTTGTTTCA GGCGTTTGGG
GCCAAGCACA CCCTGCGTGC GGGGGCTGAA ATCCTGCGAA AGGAACGGTT GAATGCGGCG
TCGGCCCCGG GCGGTACGGA TCAACGGCTG GCGCTCTTTG CGATTGATGA GCTTGATTTC
GACAATGGCC TGACGGTGAC ACCGGCGCTG CGCTACGAAC GCCAGGAGAT CGAGGCCAGC
ACGGATGGCA ACAACATCCG CGCGGGAGAG ACCTTCAACA ACAGCGCGCT CATGGGCGGG
GTCTCTGCAC GCTACGCGTT CCAGAACGGC TTTGCGGTAT TTGGCTCGGT CGCCTATACG
GCCGGTTTCC CGATCATCGA CGATGTTGAT TACGCCGACT ATCCGACCTT GATGACCCAG
ACTGAAAAAG CGGTCACGCA TGAGATCGGC GCGTCCTTTG ACCGGGTTGG CGTATTTGCC
TCCGATGATG TTGTGATGGC CAAGGTGAAC CTCTGGCAGA CCAGACTCTG GGACTACACC
TCGTCGGGAT CCAGCTTTGC CGAGTTTGAC CGTCAGGACA CCAAGGGCGT GGAGATCGAG
GCCTCTTACA GCCATATGTC GGGGTTCTAT GTGGATATGA ACGCCAACAT CAGCAGCGGC
CATTGGACCA AATTCCAGAG CGGAACCAAT GAGCGCTATC GCGAGCGCTA TGATGGCATG
CCGCCCACCA ATCTGGCGCT GACCCTCGGC AAGAAGTTCA ACGAACAGCT CGATGTGTCC
TGGGAAGGCG CGTTCTTCAA GCGGTTCGAA GACACCCCCG GGTTTGCGGT GCACAACCTG
CGGGCCTCTT ACGACATCGA CACGGGGTTC TTGAAAGAAG CCAAGCTACG CGTGGGCGTC
GATAACCTTT TTGACAAGCA ATATCAGACG CATCTGGCGA CGCGCCCGGC GCCGGGTCGC
AACATCAAAG TGTCGCTGAC GGCGGCTTTC TAA
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| Protein sequence | MQIKDMRGVL LCSASAMALA LSAPVAKAQD VSEEDGFLGL LVLGNNKREV QTDTAAPETV
INAEEIQDRQ ASSIAELIDS VPGVALVNSG TPTGAGINIR GHGADGTYGA NQKVQIQIDG
ASVGSEELYR IGTQLTTDPE LYREVSVIRG TVGSFEYGSG VIGGVVRLDT INASDLTDGQ
VGLSGRQTLG YHGNSNARIS STILGWQPTE NLEFLFNYTR REQDDYTDGN GDVVSDTASE
VSSLLLKGKY SFGDNAAQSL TLSFNESTSD EKDVPYDAFA GNAAFGNVDR LTETKSAVLE
YAYNPLGNDL VDLTATLSYA DQYIEQEQVS GTPFGIQDAD HRYETTKLTV KNSALFQAFG
AKHTLRAGAE ILRKERLNAA SAPGGTDQRL ALFAIDELDF DNGLTVTPAL RYERQEIEAS
TDGNNIRAGE TFNNSALMGG VSARYAFQNG FAVFGSVAYT AGFPIIDDVD YADYPTLMTQ
TEKAVTHEIG ASFDRVGVFA SDDVVMAKVN LWQTRLWDYT SSGSSFAEFD RQDTKGVEIE
ASYSHMSGFY VDMNANISSG HWTKFQSGTN ERYRERYDGM PPTNLALTLG KKFNEQLDVS
WEGAFFKRFE DTPGFAVHNL RASYDIDTGF LKEAKLRVGV DNLFDKQYQT HLATRPAPGR
NIKVSLTAAF
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