| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0342 |
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| Symbol | |
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| ID | 4076043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 347255 |
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| End bp | 349738 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005637 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_612337 |
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| Protein GI | 99080183 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3452] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGATT GGTTGCAGTC ATTTTTTGTA GCTCTGGGGA ACCGGACGTA TCTGCCAACC
TGGATCGCAC TCTTTGTCGT TGGCATCGCC TTTGCCTATG CAGAGAGACA GAACCAGATC
ATCAATGATC AGGAACTGCG CGCCGAGGTG CAGGCAGAAG TCGGGCTGAT CCGATCCCAT
CTCGAAGGCA AGCTGACAGC AGATGTGCAG CTGATCAAAG GTCTTGTCGG GGCGTTGATG
GCTGAACAGC TGATGACGCA GGAAACCTTT AACGAGGTGG CCTCTTACGC TGCCGGTGAT
CGGCATGAAA TCCTGAACAT CGCCATCGCG CCCGATCTGG TTGTCACCAT GGTCTACCCC
TACGAGCGCA ACAAGGCGGT GCTCGGCCTT GATTACAACA AGAACGAAGC CCAGCGAGAA
GCCGTCATGC GCATGCGTGA CAGTGGCGAG ATCGTGTTGG CCGGTCCGGT GAACCTCGTG
CAAGGGGGCA CGGGGTTTAT CATTCGCTAC CCGGTCTTTG CCGGTGAAGG CGCGGATCGC
AGGTTCTGGG GTATGGTCGC GGCCGTGATC GACGCCGATG CACTTTATGC GGAGGCGGGG
CTCGCGGCAG AGGACCTGCC GATTGAAATC GCACTCAGTG GCCGTGACGG GACAGGCCAT
CAGGGCGGTG TTTTCTACGG GGATCAGAAC ATTCACGACC ATGATCCGAT TGTGACGGAT
GTGTTTCTGC CAACCGGCAC CTGGGAATTG GCGGCGATTC CGCGTGGCGG CTGGCCCAAA
CAGCCCGGGA ACCTGCTAGA ATTGAGGCTG GTCCTTTTGG CGGCCGGGAT CTTGATCATT
GTGCCGACGT TCATGGCATG CCGGCTCTCT GCGGTGCGGC GGGCGACCAT CAACACGCTG
CGCAAACGTG AAACCGAGCT GGAGCGCAAT CAGGCGGAGC TTGAACAGCT CTCGACCGTG
GCGCAGAACG CATCGGACAG CATCGTTCTG AGCGGTCCAG ATCAGCGGAT TTTCTGGGTC
AACGAGGCGT TTTCGCGCAT GACTGGCTAC ACGGTTGACG AGGCCGTCGG CAAACGTCCC
GGCGAGCTGT TGAACGGACC TGAGACCGAC CCGGCCACCA TCCGCGAGAT CAGCGAGTAT
ATCTCGCGCG GGGAGCGGCT CCACCGCGAG ATCCTGAATT ACACCAAAAG CGGCAAGACG
ATTTGGGTCG ATACCAATCT TGTGCCCGTG CTTGATGAGG ACGGCGAGAT AAACATGGTG
ATTGGCATCG AACGCGATGT GACCTCGCAA AAGCAGAACG CGGCAGAACT GGCGGTGGCC
AAGGTTGCGG CAGAGCAGGC AGATCGCACC AAGACGGAAT TTCTCGCCAA TATGAGCCAT
GAGATCCGCA CCCCCATGAA CGGCATCATC GGCATGGCGG ATCTCCTGTC GGAGACGGAG
CTACACGAGG ATCAGGAGCA ATATGTCCAG ATCATCCGCA CCTCCTCGAA GGCGCTGTTG
AAGATCATCA ACGACATTCT GGATCTCACC CGGATGGAGT CCGGCAAACT CTCGCTGGAG
CCTGTCGATT TCGATCTTGA GAGCTGCATC GAGAATGCTG TTGATATTCT GCGTCCCGTC
GCCAGCGAAA AGGGGCTGGA TCTGACCGTC AATTACGCCT CGGGGCTGCC AAGAACCGTA
CGGGCTGATG ATGGACGCCT GCGACAGATC CTTGTGAACC TCGTGGGCAA TGCAGTGAAA
TTCACGGCCT CCGGTCGCGT GGACGTGCGC GTGCTCTGCG CATCAACCAA CCCCTACCGG
CTGACGATCG ACGTGCAGGA CACCGGGATC GGCATGACGT CAGCACAGCT GCACAATATC
TTTGATCGGT TTTCGCAGGC AGATGCGGCG ACCACGCGCT CCTTTGGTGG CACCGGCCTC
GGGCTGACGA TCTCGCGCTT GCTGGCAAAG CAGATGGACG GGGATATCAC CGTGTATTCC
GACCCGGGAC GAGGCAGCTG TTTCTCGCTG CATATCCAGT GCCAGGCGCC CCTTGGCCTG
CCCGGGCATA TTGACGCCGA CGAAGCGCCG GATCTCGATC TGATCTATGG CTGCAAGGTC
CTGCTGGCCG AGGACAATCG CACCAACCGC CTGTTGATCC GCAAATACCT CTCGGATCTC
TCTGTCGATC TGATCGAAGC CAGCAATGGC CAAGAGGCGG TGGAACTCTG CGCGCATCAT
CGTCCGGATC TGATCCTGAT GGATATGTCG ATGCCGGAAA TGGACGGGCT CACGGCGACC
CGTCTGATCC GCATGCCGCA AAACCCGCAC CAACCACCAA TCGTGGCTTT GACGGCCAAT
GCCTTTGCAA GCGATCGGGA GGCTTGTCTG GCGGCCGGGA TGAACGGCTT CTTGTCAAAG
CCCATCAACA AGCGCGAGCT CTTGCACGGA ATGGCCGGTG TGCTTGATGA CCCTGACAAC
CTCAGACGCG TTGCAAGCGG CTGA
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| Protein sequence | MRDWLQSFFV ALGNRTYLPT WIALFVVGIA FAYAERQNQI INDQELRAEV QAEVGLIRSH
LEGKLTADVQ LIKGLVGALM AEQLMTQETF NEVASYAAGD RHEILNIAIA PDLVVTMVYP
YERNKAVLGL DYNKNEAQRE AVMRMRDSGE IVLAGPVNLV QGGTGFIIRY PVFAGEGADR
RFWGMVAAVI DADALYAEAG LAAEDLPIEI ALSGRDGTGH QGGVFYGDQN IHDHDPIVTD
VFLPTGTWEL AAIPRGGWPK QPGNLLELRL VLLAAGILII VPTFMACRLS AVRRATINTL
RKRETELERN QAELEQLSTV AQNASDSIVL SGPDQRIFWV NEAFSRMTGY TVDEAVGKRP
GELLNGPETD PATIREISEY ISRGERLHRE ILNYTKSGKT IWVDTNLVPV LDEDGEINMV
IGIERDVTSQ KQNAAELAVA KVAAEQADRT KTEFLANMSH EIRTPMNGII GMADLLSETE
LHEDQEQYVQ IIRTSSKALL KIINDILDLT RMESGKLSLE PVDFDLESCI ENAVDILRPV
ASEKGLDLTV NYASGLPRTV RADDGRLRQI LVNLVGNAVK FTASGRVDVR VLCASTNPYR
LTIDVQDTGI GMTSAQLHNI FDRFSQADAA TTRSFGGTGL GLTISRLLAK QMDGDITVYS
DPGRGSCFSL HIQCQAPLGL PGHIDADEAP DLDLIYGCKV LLAEDNRTNR LLIRKYLSDL
SVDLIEASNG QEAVELCAHH RPDLILMDMS MPEMDGLTAT RLIRMPQNPH QPPIVALTAN
AFASDREACL AAGMNGFLSK PINKRELLHG MAGVLDDPDN LRRVASG
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