| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0333 |
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| Symbol | |
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| ID | 4076229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 337542 |
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| End bp | 338690 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005628 |
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| Product | gamma-butyrobetaine,2-oxoglutarate dioxygenase |
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| Protein accession | YP_612328 |
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| Protein GI | 99080174 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | [TIGR02409] gamma-butyrobetaine hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.561528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAC TCTCCGTTGA CCCATCCGGA ACCTATCTGA GCCTTGAAAC CGCCACGGGT
ACGCAGCGGT TCCATGCGAT CTGGCTGCGT GACAATGCGC AGGATGCCGA GACCCGCGCG
CCGGGGAACG GCCAGCGGTT GATCGCCCTG CGCGATATCC CCGCTGACAC AAGGATCGCC
ACCGCCCAGA TCAACCCGGA CGGGGTGGTG CAGGTGCGCT TTGCGCCAGA GGACAAGACC
GTTGACTATG ATCTTGCGTG GCTTGAGGCG CATTCCTACG ACCGCGCTGC CCCCAGCACC
CAAGGGTGGC TCGCCCAAGA AATCGAGCCA TGGGATGCGG GGCTGATGGG CAATGTGCCA
TGTGGGGATT TTGCGGCGCT CGCCGAGGGT GGTCAGGCGC TGCGTGACTG GCTTGGGCAG
ATTGTGCGCT ACGGCTTTGC CAAGCTCAAG AATGCCCCGG TGGAGCCGGG CGGGCTGTTC
AAGGTGGTCG ATCTCTTTGG CTTTGTGCGC GAGACCAACT ACGGGCGGCA TTTTGAGGTG
CGTACCGAGG TGAACCCCAC AAACCTTGCC TTCACCGGGC TCGGGCTTCA GGCGCATACG
GACAACCCCT ACCGCGATCC GGTGCCGACG CTTCAGGTGC TCTATTGCCT CGAGAGCTCT
GCCGCCGGAG GCGAGAACAT GGTGGTCGAC GGCTTTGCCG CCGCGCTGCG CCTGCGCGAA
GAAGACCCGG AGGGATTTGC GCTTTTGGCG ACGCATTGTG CAAAGTTTGA ATATGCGGGC
GAGGCGAGCG TGTGTCTGAC CTCTCGGCGT CCGATGATCG AGCTGGCACC GGATGGGGAG
CTGATCGGCA TTCGGTTCAA CAATCGCTCC TGCGCCACCA TCACGGATGT GCCCTTTGAC
AAGATGGAGG CGTATTATGC CGCCTACCGA CGCCTTGGCG AGATCATTGA TGATACGGCG
ATGGAGGTGA CGTTCCGGCT CGAGCCGGGT GAGGCCTTTG TGGTCGACAA CACCCGTGTT
CTGCACGCGC GCAAGGGCTA TTCGGGCGAG GGGACACGCT GGCTGCAAGG GTGCTACGCC
GACAAGGACG GGCTGCGCTC CGCCTATCAT GCGATGATGC GGGATGCGCG CGTGGAGGCT
GCGGAATGA
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| Protein sequence | MPTLSVDPSG TYLSLETATG TQRFHAIWLR DNAQDAETRA PGNGQRLIAL RDIPADTRIA
TAQINPDGVV QVRFAPEDKT VDYDLAWLEA HSYDRAAPST QGWLAQEIEP WDAGLMGNVP
CGDFAALAEG GQALRDWLGQ IVRYGFAKLK NAPVEPGGLF KVVDLFGFVR ETNYGRHFEV
RTEVNPTNLA FTGLGLQAHT DNPYRDPVPT LQVLYCLESS AAGGENMVVD GFAAALRLRE
EDPEGFALLA THCAKFEYAG EASVCLTSRR PMIELAPDGE LIGIRFNNRS CATITDVPFD
KMEAYYAAYR RLGEIIDDTA MEVTFRLEPG EAFVVDNTRV LHARKGYSGE GTRWLQGCYA
DKDGLRSAYH AMMRDARVEA AE
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