| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0288 |
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| Symbol | |
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| ID | 4077423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 294157 |
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| End bp | 295488 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638005582 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_612283 |
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| Protein GI | 99080129 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC TCTTTGACAG CGAGGAGGCG GGCGCTCGGG CGGCGCAGAA CGGGGCCAGT
GATGCCCCGC GCCCGCTCGC GGACCGGTTG CGGCCCCGAA CCCTTGCAGA GGTGATCGGG
CAGGACCAGG TGCTGGGTGC AGAGGCGCCT TTGGGGGTGA TGCTCAGCTC GGGGAGCCTC
TCGTCGCTCA TTTTCTGGGG GCCGCCGGGT GTCGGGAAGA CCACCATCGC GCGGCTCCTG
GCGCAGGAGA CGGATCTGCA TTTTGTGCAG ATCTCGGCGA TCTTTACCGG TGTACCGGAT
CTGAAGAAAG TGTTCGAGGC CGCCAAGATC CGGCGCCAGA ACGGGCAGGG CACGCTCTTG
TTCGTGGATG AGATCCACCG TTTCAACAAG GCCCAGCAGG ACGGGTTCCT GCCGCATATG
GAGGATGGCA CCATCCTTCT GGTGGGGGCC ACCACGGAGA ACCCGAGCTT TGAACTCAAT
GCCGCGGTGT TGTCGCGCGC GCAGGTTCTG GTTCTGGAGC GCCTGAGCCT TGCGGATCTG
GAGCGGCTGA CGCAGCGCGC GGAACAGGCG CTGGAGCGCC GCTTGCCGCT GTCGCCCGAG
GCGCGCGATG CGCTGCATCA GATGGCCGAT GGCGACGGGC GGGCGCTCTT GAATTTGATC
GAGCAGGTCT CGGCCTGGAA GGTCGACCAG CCCCTGGGCC GCGAGGCGCT GGCGACGCGG
CTGATGCGGC GGGCGGCGAA ATACGACAAA TCCGGCGATG AGCATTATAA CCTCATCTCG
GCGCTGCATA AATCGGTGCG CGGTTCGGAC CCGGATGCGG CCCTTTATTG GTTTGCGCGG
ATGCTGGAGG GCGGCGAGGA CCCCAAATAC CTCGCCCGGC GCCTGACCCG GATGGCGGTG
GAGGATATTG CGCTCGCGGA TCCGCAGGCG CAGGCGATCT GCCTTCAGGC CTGGGAGGCC
TATGAGCGGC TAGGCTCGCC CGAGGGCGAG TTGGCGCTGG CGCAGGCGGT GATCTACCTC
GCGCTCGCGC CCAAGACCAA CGCGGGCTAC ATGGCCTATA AGGCGGCGCG GCGTCTGGCC
AAGGAGACCG GGTCGATGTC GCCACCCAAA CATATCCTCA ATGCGCCGAC CAAGCTGATG
GCGGAGCAGG GCTATGGCAA GGGCTATGAC TACGACCATG ATGCCGAGGA TGGGTTTTCG
GGGCAGAATT ATTTTCCCGA CGGGGTCAAA CGCCCTGTGC TTTATCAGCC GGTGGAGCGC
GGGTTTGAGC GCGAACTGCG CAAGCGCACG GAATTCTTTG CCAAGAAACG CATCCAGCGC
CAAGGAGAGT AA
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| Protein sequence | MADLFDSEEA GARAAQNGAS DAPRPLADRL RPRTLAEVIG QDQVLGAEAP LGVMLSSGSL
SSLIFWGPPG VGKTTIARLL AQETDLHFVQ ISAIFTGVPD LKKVFEAAKI RRQNGQGTLL
FVDEIHRFNK AQQDGFLPHM EDGTILLVGA TTENPSFELN AAVLSRAQVL VLERLSLADL
ERLTQRAEQA LERRLPLSPE ARDALHQMAD GDGRALLNLI EQVSAWKVDQ PLGREALATR
LMRRAAKYDK SGDEHYNLIS ALHKSVRGSD PDAALYWFAR MLEGGEDPKY LARRLTRMAV
EDIALADPQA QAICLQAWEA YERLGSPEGE LALAQAVIYL ALAPKTNAGY MAYKAARRLA
KETGSMSPPK HILNAPTKLM AEQGYGKGYD YDHDAEDGFS GQNYFPDGVK RPVLYQPVER
GFERELRKRT EFFAKKRIQR QGE
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