| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0263 |
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| Symbol | rpsQ |
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| ID | 4077671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 275991 |
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| End bp | 276221 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638005557 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_612258 |
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| Protein GI | 99080104 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.308255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.630615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAAAC GTATCCTGCA AGGCGTCGTG ACCTCCGACG CAAACGCTCA GACCGTCACC
GTGTCCGTGG AACGTCGTTT CACACACCCG GTTCTGAAGA AAACCATCCG TAAGTCCAAG
AAATACCGGG CTCACGATGA AAAGAACGCT TTCAAGGTCG GCGACACCGT ACGCATCATC
GAATGCGCGC CGAAATCGAA AACGAAACGC TGGGAAGTTC TGGAAGCCTA A
|
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| Protein sequence | MPKRILQGVV TSDANAQTVT VSVERRFTHP VLKKTIRKSK KYRAHDEKNA FKVGDTVRII
ECAPKSKTKR WEVLEA
|
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| |