| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0255 |
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| Symbol | rpsC |
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| ID | 4076015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 270443 |
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| End bp | 271162 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005549 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_612250 |
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| Protein GI | 99080096 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACATA AAGTCAATCC GGTTGGCATG CGCCTGCAGA TCAACCGCAC CTGGGACAGC
CGCTGGTACG CTGACACCAA GGACTACGGT GATCTCCTCC TCGAGGACAT CAAGATCCGT
GAGTTCATCA AAGAAGAGTG CAAGCAGGCC GGTGTTGCCC GCGTGATCAT CGAACGCCCC
CACAAGAAGT GCCGTGTGAC CATTCACACC GCGCGTCCGG GCGTGATCAT CGGCAAAAAA
GGCGCGGACA TCGAAGTTCT TCGCAAGAAG ATCGCTTCCA TGACCGACTC CGAGCTGCAC
CTCAACATCG TTGAGGTTCG CAAGCCGGAA CTCGACGCAC AGCTCGTTGG CGAGTCCATC
GCTCAGCAGC TGGAGCGCCG TGTGTCCTTC CGCCGCGCGA TGAAGCGGGC CGTGCAGAAC
GCCATGCGCA TGGGCGCCCT GGGTATCCGG GTGAACGTCG CTGGTCGTCT GGGCGGTGCA
GAAATCGCAC GTACCGAATG GTACCGTGAA GGTCGTGTGC CGTTGCACAC CCTGCGCGCA
GACATCGATT ACGCACACTC TGAAGCATCC ACCCCCTATG GTATCATCGG TATCAAGGTC
TGGATCTTCA AAGGTGAGAT CATGGAGCAT GATCCTCAGG CGCGTGATCG CAAGGCTCAG
GAACTCCAGG ACGGTCCGGC ACCTCGCGGT GCAGGCGGTA ACCGTCGTGG CGATCGCTAA
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| Protein sequence | MGHKVNPVGM RLQINRTWDS RWYADTKDYG DLLLEDIKIR EFIKEECKQA GVARVIIERP
HKKCRVTIHT ARPGVIIGKK GADIEVLRKK IASMTDSELH LNIVEVRKPE LDAQLVGESI
AQQLERRVSF RRAMKRAVQN AMRMGALGIR VNVAGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYAHSEAS TPYGIIGIKV WIFKGEIMEH DPQARDRKAQ ELQDGPAPRG AGGNRRGDR
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