| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0226 |
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| Symbol | secE |
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| ID | 4076259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 241515 |
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| End bp | 241712 |
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| Gene Length | 198 bp |
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| Protein Length | 65 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005520 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_612221 |
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| Protein GI | 99080067 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.33445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACCA TCAATCCCGT TAAGTTCATC CAGCAGGTGC GCGCAGAAGT CAGCAAGGTT
GTCTGGCCGA CCCGTCGCGA GGTTCTGCTG ACCACGGTCA TGGTGTTCAT CATGGCGGCT
CTGGCTGCGG CATTCTTTGC TGTGGTGGAC CTCTTGATCC GCACCGGTCT CAACGGTGTG
CTCGGGCTCT TTGGCTGA
|
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| Protein sequence | MATINPVKFI QQVRAEVSKV VWPTRREVLL TTVMVFIMAA LAAAFFAVVD LLIRTGLNGV
LGLFG
|
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| |