| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0221 |
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| Symbol | |
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| ID | 4076254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 236023 |
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| End bp | 237453 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005515 |
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| Product | histidine kinase |
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| Protein accession | YP_612216 |
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| Protein GI | 99080062 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.641728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATC CTGCGTATGA TGCCATGACC CCAGAGGAGT TGCGCGCGGC TTTGATGCAA
GAGCGCAGGT TGCGCGCAGA ACTCGAAGAA TCCATGGAGC GCAAGTCCCA ATCGCTGCGC
CGGGCGAACG CGTCCCTCGT GTCCTTGGCC CGACAGATCG ACCGGATGGT CAAAGAGCGC
ACCGAAGACC TCGCCCGCGA CCGGGCCGAG GCGGAGGCCG AAAGTGCCGC AAAGACCCAG
TTTCTGGCCA CGATGAGCCA TGAAATCCGC ACCCCGCTCA ACGGTGTTCT CGGGATGGCA
TCGGCACTTG CGGATACCGA ACTGGCCGAG CGTCAATCGC AGATCCTTGG GGTTCTACGC
GAAAGCGGGC AATTGCTCCT GAACATCGTT GATGACATTC TCGATCTCTC CAAGATCGAA
GAGGGCAAGC TCGAACTCGA ACGTCTGCCG ACAGATGTGG TAGCTTTGAT CGAGACGGTT
TATCGCCAGT TCAAACCGCG TATCGAGGCC AAGGGGCTCA ATTTCAGCTC GATCTATGGC
GAGGGGTTGG CGCAGGGCCC CGCCTGGGTC CACATCGATC CCACCCGATT CCAGCAAGTG
CTGACCAACC TGTTGTCCAA TGCGATAAAA TTCACCGACA CGGGTGCGAT TGCGCTTTCG
TCCAGCCTTG TCTTGCAGCA CGACGGTGAG CTCATTTTAT GCGTTGCCGT GCGCGATACC
GGCGTCGGGC TCACGGATGC GCAAGTGGAG CGCTTGTTCC AACCCTACAT GCAGGCCGAT
GCGAGCGTGG CGCGCAGCCA TGGCGGCACC GGTCTTGGCT TGGCCATCGC GCGCCAGATC
TGCGAGCGCA TGGGGGGCAC CCTGACCTGC CGCAGCCATG AGGGCGATGG CAGCGAATTC
TGCGCGACCT TTCGCGCCGC TCCGGCAGAG CCCGTGGTCT CGTCCCATGA CCCCCAGGAC
GAGAACGAAC TGGAGGCGCT GAGGGCGCAA CGCTGGAAGG TGCTGGTGGC CGAGGACAAC
CGAACCAACC GGATGGTTCT CCACCATATC CTGCGCGGCT ATGACCTGGA TTTGTACTGG
GTGGACAATG GCGAAGAGGC GGTAAAAACC TGGCGTCAAG AACGGCCGGA TCTGGTGCTG
ATGGATGTGA ATATGCCGCA GCTCGACGGG GTGTCTGCGA CCTCTGTAAT CCGTCAAGAA
GAGGCTGATG CACAAGCCGC GCCGGTGCCG ATCATTGCGG TGTCGGCCAA TGCGCTGGTG
CATCAGATCA AAAGCTACCT CGCGAGCGGC ATGACCGACC ATGTCGCCAA ACCGATCCGC
AAGAAAAAGC TGTTGTCAGC CATGGCGCGC GCGTTGAAGT CCCGCCCAAC GCTGCCCCCC
GTGCCAGAAG AACCAGCGGA CAAAGGCGCA GCGCGGGTGC TCTCGCCCTA G
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| Protein sequence | MSDPAYDAMT PEELRAALMQ ERRLRAELEE SMERKSQSLR RANASLVSLA RQIDRMVKER
TEDLARDRAE AEAESAAKTQ FLATMSHEIR TPLNGVLGMA SALADTELAE RQSQILGVLR
ESGQLLLNIV DDILDLSKIE EGKLELERLP TDVVALIETV YRQFKPRIEA KGLNFSSIYG
EGLAQGPAWV HIDPTRFQQV LTNLLSNAIK FTDTGAIALS SSLVLQHDGE LILCVAVRDT
GVGLTDAQVE RLFQPYMQAD ASVARSHGGT GLGLAIARQI CERMGGTLTC RSHEGDGSEF
CATFRAAPAE PVVSSHDPQD ENELEALRAQ RWKVLVAEDN RTNRMVLHHI LRGYDLDLYW
VDNGEEAVKT WRQERPDLVL MDVNMPQLDG VSATSVIRQE EADAQAAPVP IIAVSANALV
HQIKSYLASG MTDHVAKPIR KKKLLSAMAR ALKSRPTLPP VPEEPADKGA ARVLSP
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