| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0213 |
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| Symbol | |
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| ID | 4078661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 229195 |
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| End bp | 230097 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005507 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612208 |
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| Protein GI | 99080054 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATCA TTTTGGTGCT CAATTCTACC TGGCTCGAAA CCTTTACCGT GCTCGCCGAA
GAAGGGCATT TCACCCGCGC GGCGGCCCGC TTGAATATGA CGCAGCCCGG AGTGTCCCAG
CACCTGCGCA AGCTCGAGCA GCAATTGGGA CGGGCGCTGA TCTCGAAGGA GGGCAAGCGC
TTCACCCTGA CCTCCGCCGG GGAGGCAGTG CGCGACCTCG GGTTGGCGCG GCGTGTCGAG
GAGCAGGCGC TGCGCGATAC AATTACGCGC GATGATCCGG ACCGAGGGGA GCTGCGGATC
GCATGCTCTG GCAGTTTTGC GATGCTGTTT TACCCACGCG CCATCGCGTT GATGAAAGAG
GCACCGGGGC TTGTGATCCA TGTGGAGGCT ACGCCGCAGG CGCGCGTGCT AGAGGGTGTT
CTGGCCGGGC ATTTTGATCT TGGGATTGTC TCTGATGTCC CACACCATCC ACGTGTCGAA
GCACAGCAAC TGGGGCAGGA GGAACTGTGC TTGCTGTTGC CGGCTGAGGT CGAGGACCCG
GTGTCTTTCG AGACGCTTGA AGCCCTGGGA CTGGTCGCAC ACCCGGATGT GGCCAACTAT
GCGGATGATC TGTTTTCACG TAACTTCCCC ATAGATTTTG CTGGGGCGGA CCGGTTGAAG
CTGCGCACTT ATATCAACCA GATCAGCCAG ATCCCGTCTC CGGTGGCCGC TGGGGTTGGC
TATACGCTGC TTCCGCGCAG TGGTCTTGCG GCGTTTGCGC AATCGGCACA GATCAGGACG
GCGCGCCTGC CGCAGCCACG GTATCGGGAG CTCTGGCGCA TAACCCGTCG CGGACGTATC
GCAAGCGCGC GGCTAAAGCG GGTCTTGGCG GTCGTCGAAG ACATCGCCGC GACCTTGGGA
TGA
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| Protein sequence | MVIILVLNST WLETFTVLAE EGHFTRAAAR LNMTQPGVSQ HLRKLEQQLG RALISKEGKR
FTLTSAGEAV RDLGLARRVE EQALRDTITR DDPDRGELRI ACSGSFAMLF YPRAIALMKE
APGLVIHVEA TPQARVLEGV LAGHFDLGIV SDVPHHPRVE AQQLGQEELC LLLPAEVEDP
VSFETLEALG LVAHPDVANY ADDLFSRNFP IDFAGADRLK LRTYINQISQ IPSPVAAGVG
YTLLPRSGLA AFAQSAQIRT ARLPQPRYRE LWRITRRGRI ASARLKRVLA VVEDIAATLG
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