| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0189 |
|---|
| Symbol | |
|---|
| ID | 4078421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 207790 |
|---|
| End bp | 208269 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638005483 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_612184 |
|---|
| Protein GI | 99080030 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAG CGCTTGATAT TCGCCCTGCA GATCCCGCCA GCGCCCCCGT AAAACCACTA
CTGGAAGCGC ATCTGAAACA TACCTCGACC ACCAGCTCGC CCGAAGCCTG TCACGCGCTG
GATCTCGACG CGCTCAAAGC CCCGGAGATC CACTTCTTCG CCGCATATGA CAACGACATT
GCAGTTGGCT GTGGCGCTCT CAAGGACCTT GGACAAGGCC AGATGGAAGT CAAATCCGTG
CATGTGGCCG CCAGCGCTCG CGGACGCGGC ATTGCCCGTG CCCTCATGCT CAGGCTGCAC
GCCTTTGCCG CACAATCCGG TGCAAGAACC CTGTTCCTCG AGACAGGTTC AGACCAGTTG
CCAGCCTTTG ATGCCGCCCG TGCGCTCTAT GAGCGCCTCG GCTACACGTA TTGCGCACCA
TTTGGCGACT ACACTGCGCA TCCAGAAAGC GCTTTTATGC GCTATGCATG CGCGGGCTAG
|
|---|
| Protein sequence | MPTALDIRPA DPASAPVKPL LEAHLKHTST TSSPEACHAL DLDALKAPEI HFFAAYDNDI
AVGCGALKDL GQGQMEVKSV HVAASARGRG IARALMLRLH AFAAQSGART LFLETGSDQL
PAFDAARALY ERLGYTYCAP FGDYTAHPES AFMRYACAG
|
|---|
| |