Gene TM1040_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0179 
Symbol 
ID4078411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp198664 
End bp199296 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID638005473 
Productmetal dependent phosphohydrolase 
Protein accessionYP_612174 
Protein GI99080020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.475429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTCA CCGACCTTGT CACCCCGCCC GACACAGCCC TCTGCGCCGC CGCAGAAGAG 
ATGGCGCGCA TGGCCAGCGA TCCCTTCCTC TACAACCATG TCAGCCGCTC CTATATCTTT
GGCGCGCTGG CGGCGCGCGC AACGGGCACG CAGTATGATC CGGAGCTGTT TTACATCGCC
GCCATGCTGC ACGACCTTGG CCTGACCGAA ACCTATATGG CAGAAGATCG CTTTGAGGTG
GACGCCGCCG AAGCCGCCGC CAAGTTCCTT GCGGCGCAAA ATGTCGAACA ATCCCGCATC
GACCGTGTCT GGGATGCGAT TGCGCTGCAC ACGACGTTTT CGATCCCGCA AAAAAAGTCG
CCCGAGGCAG CCTTGGTGCA GATCGGCGCG GGGCTCGATG TGGGCGTCAT GCCGCATGAC
CATATCACCC CAGAAGTGAT GGAGCAGGTG CTTGACGCCT ACCCTCGACT GGGGTTCAAA
AAGGCCATGG AACAAGCCCT CATCAAGGTC TATGCCGCCA AGCCCATGAC GGCGATGCAT
AATTTTGGCG CCGACGTGGC CCATCGTCAT GTGCCGGACT TTCACCCGCC GCATTTTTGC
GATGTCCTGC ATGGGGCGGA TTTCCCCGAA TGA
 
Protein sequence
MLLTDLVTPP DTALCAAAEE MARMASDPFL YNHVSRSYIF GALAARATGT QYDPELFYIA 
AMLHDLGLTE TYMAEDRFEV DAAEAAAKFL AAQNVEQSRI DRVWDAIALH TTFSIPQKKS
PEAALVQIGA GLDVGVMPHD HITPEVMEQV LDAYPRLGFK KAMEQALIKV YAAKPMTAMH
NFGADVAHRH VPDFHPPHFC DVLHGADFPE