| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0167 |
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| Symbol | |
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| ID | 4078775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 184138 |
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| End bp | 184677 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005461 |
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| Product | protein tyrosine phosphatase / dual specificity protein phosphatase |
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| Protein accession | YP_612162 |
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| Protein GI | 99080008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGTG CTACGAAATT GCAGCCGCAG CAGGCTGAAC CAACTTTGTC GCTACATGCG
CTTTCGGTGG GCGATGGGAT CCTCGCCCTG AGCCGGGCGC CCGGTGCAGG GGGCGATTAT
GCCGCCGATC TGCGCCTGAT CCACGAATGG CGCCCGTCTA TGGTGATCTC GATGACCACG
CGCGTCGAGC ATGTTATCCT TGGCGTAGAG ACTCTGGGCA CGGACATTCA GGGGCTTGGC
AGCCGCTGGT TTCATATGCC GGTTGAGGAT TACCAGACCC CGACAAAGGA TCTTGAGGAT
CATTGGCATC AGGTCAGCGC GCTCGCGCGG CAGGCCTTGT CGGGTGGAGG GCGTGTCCTT
GTGCATTGCC GTGGCGGCTG TGGACGATCC GGCATGGCAG TGCTCCGGCT GATGATCGAG
AGCGGCGAGC CGCCGGATGC AGCTCTTGCA CGGCTCAGGG CCCTGAGGCC CTGTGCGGTG
GAAACGGATG CGCAGATGGC CTGGGCCTAT GGCCGCCGTC GCCAAGCGCC GCCAGCATAG
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| Protein sequence | MVSATKLQPQ QAEPTLSLHA LSVGDGILAL SRAPGAGGDY AADLRLIHEW RPSMVISMTT
RVEHVILGVE TLGTDIQGLG SRWFHMPVED YQTPTKDLED HWHQVSALAR QALSGGGRVL
VHCRGGCGRS GMAVLRLMIE SGEPPDAALA RLRALRPCAV ETDAQMAWAY GRRRQAPPA
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