| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0164 |
|---|
| Symbol | recR |
|---|
| ID | 4078772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 180902 |
|---|
| End bp | 181501 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638005458 |
|---|
| Product | recombination protein RecR |
|---|
| Protein accession | YP_612159 |
|---|
| Protein GI | 99080005 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00615] recombination protein RecR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC AGGACAACAG CGATATCGAG GCATTGATTG CATTGATGGC CAAGCTACCG
GGGCTTGGCC CCCGCTCCGC GCGCCGTGCT GTGTTGCACC TGATCCGCAA GCGTGCGCTT
GTCCTGACCC CACTCGCCGA TGCCATGAGC CGTGTTGCAG AGACCGCGCG CGAGTGCCTC
AACTGCGGCA ACGTGGGCAC GAGCGACATC TGCGCGCTCT GCGAGGATGA GACGCGCGCC
AATGGCGAAC TCTGCGTGGT CGAGGATGTG GCGGACCTCT GGGCGATGGA GCGCGCTGGT
GTGTTCAAGG GACGCTATCA CGTCCTGGGC GGCACGTTGT CAGCACTTGA TGCCATTGGC
CCCGAAGATC TGCGCATCCC TCGCCTCGTG GATCGGGTCT CCACCGAAGG GGTAAGTGAG
GTGATCCTCG CACTCAACGC GACGATCGAT GGCCAGACCA CGGCGCATTA CATCGCAGAT
CAACTGTCTG GACGTGTCAA ACTCACGTCA CTTGCGCAGG GTGTGCCCAT CGGCGGCGAG
CTGGACTATC TTGATGATGG CACGATCTCG GCTGCATTGC GCGCCCGCAA GGAAATCTGA
|
|---|
| Protein sequence | MAAQDNSDIE ALIALMAKLP GLGPRSARRA VLHLIRKRAL VLTPLADAMS RVAETARECL
NCGNVGTSDI CALCEDETRA NGELCVVEDV ADLWAMERAG VFKGRYHVLG GTLSALDAIG
PEDLRIPRLV DRVSTEGVSE VILALNATID GQTTAHYIAD QLSGRVKLTS LAQGVPIGGE
LDYLDDGTIS AALRARKEI
|
|---|
| |