Gene TM1040_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0157 
Symbol 
ID4078824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp173159 
End bp173482 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content61% 
IMG OID638005451 
ProductArsR family transcriptional regulator 
Protein accessionYP_612152 
Protein GI99079998 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGG CTGTTGCCGC GCAGGGCTTT GCTGCGATGG GATCTGAGGC TCGCCTTGAA 
GTGCTGCGCG TCCTGGTACG CGCAGGAGAA ACAGGGGTGA GCGTTGGCGA TATTCGCGAG
CGCACCGGGA TCGCAGCGTC GACTCTGGCG CATCACTTGA AATTCCTGGC TGCCGCCGGC
GTGGTCTCGC AGGAGAAAGT CGGCCGGAGC ACGATCTGTC GTGCCGATCT GGCGCATCTG
GAGCGTCTTG CGGGGTATAT CCTGAGCGAA TGCTGTCTAG ATGAAAAACT GGGGCAGGTT
GCAAGGGTGG CAAACGATGG CTGA
 
Protein sequence
MDEAVAAQGF AAMGSEARLE VLRVLVRAGE TGVSVGDIRE RTGIAASTLA HHLKFLAAAG 
VVSQEKVGRS TICRADLAHL ERLAGYILSE CCLDEKLGQV ARVANDG