| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0155 |
|---|
| Symbol | |
|---|
| ID | 4078822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 169615 |
|---|
| End bp | 171393 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638005449 |
|---|
| Product | sulfoacetaldehyde acetyltransferase |
|---|
| Protein accession | YP_612150 |
|---|
| Protein GI | 99079996 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR03457] sulfoacetaldehyde acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.316464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGA CCACCGAAGA AGCCTTTGTA AAAACACTGC AAATGCATGG TATCGAGCAT
GCGTTTGGCA TTATCGGTTC CGCGATGATG CCGATTTCAG ATCTGTTTCC CAAGGCTGGG
ATCACGTTCT GGGACTGCGC GCATGAGGGC TCCGCCGGGA TGATGGCCGA TGGCTACACG
CGGGTGACGG GCAACATGTC GATGATGATT GCGCAGAACG GCCCGGGCAT CACCAACTTC
GTCACCGCCG TAAAAACCGC CTATTGGAAC CACACGCCAC TGCTGCTGGT GACGCCACAG
GCTGCCAACA AGACCATCGG CCAAGGGGGC TTTCAGGAGG TCGAACAGAT GAAACTGTTC
GAGGATATGG TGGCCTATCA AGAAGAGGTT CGCGACCCGA GCCGCGTTGC GGAAGTTCTG
AATCGCGTGA TCTGCAACGC GAAACGCGCC TCGGCCCCGG CGCAGATCAA CATTCCTCGC
GACATGTGGA CTCAGGTCAT CGATATCGCC CTCCCCGAAA TCCTCACGTT CGAACGTCCT
GCAGGAGGGG CGCAGGCCGT CTCAGAAGCC GCCTCGCTCC TCTCTGAGGC CCAAAATCCG
GTGATCCTCA ATGGCGCAGG CGTGGTGCTC TCTGGCGGGG GTATCGCCGC CTCCATGGCG
CTGGCGGAGC GGCTCGATGC GCCGGTATGC GTTGGCTATC AGCACAATGA CGCCTTTCCC
GGCACGCATC CTCTTTTTGT GGGTCCCTTG GGGTACAATG GCTCTAAAGC GGCGATGGAG
CTGATCCGCG ATGCCGATGT CGTGCTTTGC CTCGGCACCC GACTCAACCC TTTTTCCACT
CTGCCCGGCT ATGGGATCGA CTATTGGCCA ACGGAAGCCG ATATCATTCA GGTGGACATC
AACCCAGATC GGATCGGGCT GACGAAACCG GTGCGTGTGG GGATTGTGGG GGACGCGGCC
AAAGTGGCCG ATGGCATTCT GCAACAGCTC TCAGAGGACG CCGGAGATGC CGGGCGCTCC
GCACGCAAGG CCCATATCGC AGCAACAAAA TCCCGCTGGG CGCAGCAGCT TGCCGCGATG
GACCATGAAG ACGACGACCC CGGCACCACC TGGAACGCCC GCGCGCGGTC CGCAAAACCC
GACTGGATGA GCCCACGCAT GGCCTGGCGC GCGATACAGT CCGCACTCCC CTCAGACGCC
ATCATTTCGT CCGACATTGG TAACAACTGC GCCATCGGCA ACGCCTATCC CACCTTCGAA
GCAGGCCGCA AATATCTTGC CCCGGGGCTG TTTGGCCCAT GCGGGTATGG TTTGCCAGCG
ATCATGGGCG CCAAGATCGG CTGCCCCGAG ACCCCGGTCG TGGGCTTTGC CGGAGACGGT
GCGTTTGGCA TCTCGGTAAA CGAGCTGACC GCTATTGGAC GCGCAGAGTG GCCCGCAATT
ACGCAGGTGG TGTTTCGCAA CTACCAATGG GGTGCCGAAA AACGCAACTC GACGCTCTGG
TTTGACGACA ATTTCGTGGG CACAGAACTC GACACCAAGG TCTCTTATGC GGGGATTGCA
CAAGCCTGCG GCCTGAAAGG CGTTGTCGCG CGCACCATGG AAGAGCTGAC CGCGACGTTG
CGCCACGCGA TCGAGGATCA GGGCCGAGGC ATCACCACGC TGATCGAAGC CCTGATCAAT
CAGGAGCTGG GAGAGCCCTT TCGCCGCGAC GCCATGAAAA AGCCGGTGGC GATTGCCGGG
ATCTCGGCCG CAGACATGCG TCCACAGGCG CGCGCCTGA
|
|---|
| Protein sequence | MRMTTEEAFV KTLQMHGIEH AFGIIGSAMM PISDLFPKAG ITFWDCAHEG SAGMMADGYT
RVTGNMSMMI AQNGPGITNF VTAVKTAYWN HTPLLLVTPQ AANKTIGQGG FQEVEQMKLF
EDMVAYQEEV RDPSRVAEVL NRVICNAKRA SAPAQINIPR DMWTQVIDIA LPEILTFERP
AGGAQAVSEA ASLLSEAQNP VILNGAGVVL SGGGIAASMA LAERLDAPVC VGYQHNDAFP
GTHPLFVGPL GYNGSKAAME LIRDADVVLC LGTRLNPFST LPGYGIDYWP TEADIIQVDI
NPDRIGLTKP VRVGIVGDAA KVADGILQQL SEDAGDAGRS ARKAHIAATK SRWAQQLAAM
DHEDDDPGTT WNARARSAKP DWMSPRMAWR AIQSALPSDA IISSDIGNNC AIGNAYPTFE
AGRKYLAPGL FGPCGYGLPA IMGAKIGCPE TPVVGFAGDG AFGISVNELT AIGRAEWPAI
TQVVFRNYQW GAEKRNSTLW FDDNFVGTEL DTKVSYAGIA QACGLKGVVA RTMEELTATL
RHAIEDQGRG ITTLIEALIN QELGEPFRRD AMKKPVAIAG ISAADMRPQA RA
|
|---|
| |